Gene Information

Name : y0038 (y0038)
Accession : NP_667382.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 51349 - 52830 bp
Length : 1482 bp
Strand : +
Note : residues 20 to 492 of 493 are 76.95 pct identical to residues 19 to 491 of 492 from GenPept : >gb|AAF96022.1| (AE004353) conserved hypothetical protein [Vibrio cholerae]

DNA sequence :
ATGCCTTTACATGAAGAAAATACCGTTTTAGCGGCAGAACCTGCCAGTGCAACATTCTTGCTCGACGAAATCATGTCACA
AACCCGTATGGCACCGGGAAACGATGGTTACGATATCGCTAAACAGGGTGTGGCCGCTTTTATTAGCAGTATTCTGGATA
CCGGAACCAACGAAGAGCCGATTAACAAGCTGTTAGTTGACCGCATGATCATCGAACTCGACAAAAAGTTGAGTGCTCAG
ATGGACGAGATCCTACATGCTAACGAATTCCGTGAAATAGAATCTTCATGGCGCTCATTGAAGCTGTTGGTGGATCGGAC
CGATTTCCGTGAAAACATCAAAATCAATATCATGCATGCAACGAAAGAAGAGTTGCTGGAAGATTTTGAGTTCTCGCCAG
AAATTATTCAGTCAGGCTTCTACAAACACGTTTATTCCTCAGGGTACGGCCAATTCGGTGGTGAACCCACTGCCGCGATC
ATTGGTAACTACGCGTTCAACAATAGCTCACCTGACATGAAGCTCTTGCAATACGTAAGTGCTGTTGGCGCGATGGCACA
TGCCCCCTTCTTATCCAGTGTGGCCCCTGATTTCTTTGGCATCAGCAGCTTCACTGAGTTACCCGCGATTAAAGATCTGA
AATCTGTATTTGAAGGGCCGGCTCACACCAAATGGCGTGCTCTGCGTGAGTCTGAAGATTCACGTTATCTTGGTTTGACC
ACTCCTCGTTTCCTGTTGCGCTTACCTTACTCGACCGTTGAAAACCCCATTAAAAACTTCAACTACTACGAGGATGTCAG
CCGGAATCACGAGCATTTCTTGTGGGGCAACACCGCATTCCTGCTAGCGTCCTGCCTGACCGACAGCTTCGCCAAGTACC
GTTGGTGCCCGAATATTATTGGGCCGCAAAGTGGCGGCACGGTTCACGATCTCCCGGTTCATCTCTATGAAGCGATGGGG
CAGATTCAGGCCAAAATCCCAACCGAAGTTCTGATCACTGACCGTCGTGAGTTTGAACTGGCGGAAGAGGGCTTTATCAC
CCTGACCATGCGTAAAGGCAGTGATAACGCCGCATTCTTCTCGGCGAATTCGGTGCAAAAACCAAAAGTCTTCCCGAATA
CCCGCGAAGGGAAAATGGCAGAAACCAACTACAAGTTGGGCACGCAACTGCCGTACATGTTTGTCATCAACCGCCTTGCG
CACTACATCAAAGTGCTCCAGCGCGAGCAGATTGGTTCATGGAAAGAACGACAGGATCTGGAGCGCGAGCTCAATATCTG
GCTCAAGCAGTACATTGCCGATCAAGAAAACCCACCAACGGATGTTCGTAGCCGTCGTCCTCTGCGTTCAGCGCAAATCC
AGGTACTGGATGTTGAAGGTGATCCGGGCTGGTACCAGGTTGCGATGCAGGTTCGCCCGCATTTCAAATACATGGGGGCG
AGCTTCGAGCTGTCACTGGTTGGCCGTTTGGATAAGGAATAA

Protein sequence :
MPLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSAQ
MDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAI
IGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLT
TPRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAMG
QIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLA
HYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGA
SFELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 0.0 72
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 0.0 72
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 3e-152 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
y0038 NP_667382.1 hypothetical protein VFG2093 Protein 0.0 75
y0038 NP_667382.1 hypothetical protein VFG2475 Protein 4e-160 60