|
Name : fliP (y3469) Accession : NP_670767.1 Strain : Yersinia pestis KIM Genome accession: NC_004088 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 3851390 - 3852160 bp Length : 771 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAGCCGCAGCCTTCGAGCGATAACACCGGTGACCATCATCAGCCGCGGCCTGCTGGTGGGCGGACTGCTGTATTCCCC TCTTCTGCTGGCGCAGGAGGGGGGGATCACCCTGTTCAATACCGTACAAACCGCAACGGGGCAAGATTACAACGTTAAGA TTGAAATCCTGATCCTGATGACCCTGCTCGGTTTGTTGCCGATTATGATGCTGATGATGACCTGCTTTACTCGCTTTATT ATTGTGCTGGCGATATTGCGTCAGGCACTGGGGTTACAGCAAAGCCCGCCGAATAAAGTCCTGACCGGTATCGCCCTCGC CCTGACCTTGCTGGTTATGCGCCCGGTGTGGACCAAAATTCATCAGGATGCGGTCATTCCTTTCCAACAGGATGAAATTA CGCTTTCGCAGGCTCTGGGCCGGGCAGAAGCGCCGTTGAAGAACTATATGCTCGCGCAGACCAGTACTAAATCACTGGAT CAAATGATGGCTATCGCCCAAGTCAGTGGCGAGCCACAACAGCAGGATTTGAGCGTGGTCACCCCCGCTTATGTGCTCAG TGAGCTGAAAACCGCTTTCCAGATGGGCTTTATGATTTATATCCCTTTTCTGGTGATTGACCTGATTGTGGCCAGTATTT TGATGGCGATGGGAATGATGATGCTATCGCCCTTAATTGTCTCATTGCCATTTAAATTAATGCTGTTTGTCTTGTGTGAT GGCTGGACATTAATGGTTGGCACCCTCACTGCCAGCGTTCAGGGGCTATAG Protein sequence : MSRSLRAITPVTIISRGLLVGGLLYSPLLLAQEGGITLFNTVQTATGQDYNVKIEILILMTLLGLLPIMMLMMTCFTRFI IVLAILRQALGLQQSPPNKVLTGIALALTLLVMRPVWTKIHQDAVIPFQQDEITLSQALGRAEAPLKNYMLAQTSTKSLD QMMAIAQVSGEPQQQDLSVVTPAYVLSELKTAFQMGFMIYIPFLVIDLIVASILMAMGMMMLSPLIVSLPFKLMLFVLCD GWTLMVGTLTASVQGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 2e-29 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 2e-29 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 2e-29 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-29 | 42 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 4e-31 | 42 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 4e-23 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-23 | 41 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 5e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 4e-52 | 55 |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-44 | 54 |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 9e-47 | 53 |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 6e-44 | 53 |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 2e-29 | 44 |
| fliP | NP_670767.1 | flagellar biosynthesis protein FliP | VFG1773 | Protein | 6e-28 | 41 |
