Gene Information

Name : y3388 (y3388)
Accession : NP_670687.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3736191 - 3736976 bp
Length : 786 bp
Strand : +
Note : IS1661; residues 1 to 257 of 261 are 49.22 pct identical to residues 21 to 276 of 281 from GenPept : >gb|AAK29066.1|AF345899_2 (AF345899) OrfB [Klebsiella pneumoniae]

DNA sequence :
TTGGCACGCAGTACATACTATTATCATGCATCGAAACCGGACGGTGTAATTGATGACTATGCAGATGCGGTAAAAGCGAT
TGGCGCCCTAAGCAGACGACACGCACAGCGCTACGGTTATCGCCGGATGACGGTCGCACTGAGAAAAGAAGGGTTCACAC
TGAATCACAAAACGGTGCGAAAACTGATGAATCAGCACGGGTTACTCAGCCTCATTCGGCGGAAAAAATATCGCTCCTAT
AGGGCCGATGGTGGCCGGGCATCCGATAATCTATTGGCTCGTAATTTTACATCCGAAATCAGTGGATTGAAGTGGTGTAC
AGATGTCACAGAGTTCCGAGTTGGAGCACAGAAGCTGTATTTGTCGGTGATACAAGACCTGTTTAATAATGAGATTATTT
CTTGGCATATGTCAGAAAGAGCAGCATTAATCCTGACGTGCAAGACGCTGGAAAAAGCGCTGAAAGTGAAAGGGAGAAAA
GAAGGCCTGATGTTGCACAGCGATCAGGGCTGGCATTACCGAACGCCGATGTGGCGCTCAATGCTTGTCGAGGCGGGGAT
AAGGCAAAGTATGTCACGCAAAGGCAATTGTTTAGATAATGCAGTGATGGAAAATTTCTTCAGTCACCTGAAAGCCGAGA
TGTATCACCGTAAGAAGTACGATTCAGCCACAGTTTTAAAGCGTGACATTGTAGAATATATCCATTATTACAATACAGAG
CGCATTAGCCTGAAAACAGGCGGAATGAGTCCGGCAGAATACCGGACTCAGGTAGAAAAGCAGTAA

Protein sequence :
MARSTYYYHASKPDGVIDDYADAVKAIGALSRRHAQRYGYRRMTVALRKEGFTLNHKTVRKLMNQHGLLSLIRRKKYRSY
RADGGRASDNLLARNFTSEISGLKWCTDVTEFRVGAQKLYLSVIQDLFNNEIISWHMSERAALILTCKTLEKALKVKGRK
EGLMLHSDQGWHYRTPMWRSMLVEAGIRQSMSRKGNCLDNAVMENFFSHLKAEMYHRKKYDSATVLKRDIVEYIHYYNTE
RISLKTGGMSPAEYRTQVEKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 7e-58 49
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 1e-56 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 3e-43 44
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 3e-43 44
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 3e-48 43
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-47 43