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Name : iucD (y3384) Accession : NP_670683.1 Strain : Yersinia pestis KIM Genome accession: NC_004088 Putative virulence/resistance : Virulence Product : lysine: N6-hydroxylase Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG3486 EC number : - Position : 3730087 - 3731415 bp Length : 1329 bp Strand : + Note : aerobactin siderophore biosynthesis; residues 1 to 423 of 442 are 60.28 pct identical to residues 1 to 423 of 445 from GenPept : >gb|AAK71634.1|AF335540_6 (AF335540) IucD [Shigella boydii] DNA sequence : ATGAATCAGCCTCTGGATTTCATCGGCATTGGCATCGGCCCATTTAACCTCAGTATTGCCGCACTTGGCAGTGAAGTTTC TGGCTTTAACAGTAAATTTCTCGAACGTAAACCGCACTTTTCCTGGCACCCTGGCATGATGGTGCCGGACTGCCATATGC AGACCTGCTTCCTGAAAGACTTGGTCAGCACAGTCTCCCCGACTAACACGTACAGCTTTCTTAACTATCTGGTGCAGCAT AAGAAATTCTACCGTTTTCTGACCACCGAGCACCGGACCGTTTCCCGTGAGGAGTTTGCGGACTACCTCCGTTGGGCCGC CAGTGGCATGAGTTCGCTCGAGTTTAGCCAAGATATTCAGAGCGTGGACTTTGACGACCAGCAGCGCCATTTTGTCGTTA CCACCCCGCGTAATGTCTACCACGCGCGCCACGTTTGCCTGGGGATAGGCAAACGCATCAAATTGCCAGACTGCGTGACC GAGCAAAATGACCGCTGCTTCCATGCCAGCGAAATGGCACTGCGTAATCCAGATCTGACCGGTAAACGCGTCACCATTGT GGGCGGCGGCCAGAGCGGGGCGGACCTGTTCCTGAACATCTTTCTCGCTGCATGGGGGCAGCCAAAGCAGCTGAACTGGA TTTCACGCCGTAACAACTACAACGCGCTGGATGAAGCCGCTTTTGCCAATGAGTACTTCATGCCGGAATACGTTGAGAGT TTCTACACCCTGAACGACAGCGCCAAACAGCATATGCTGGCAGAACAGAGAATGACCTCTGACGGCATTACCAGTGAATC ACTACTGGCGATTTACCGTGCTATGTACCACCAATTTGAAGTGTTACATGAAAAACCGTGGGCGCGCCTGCTCCCCAGCC GCTCACTGACCAATATGCATACGCGCGGCAACGGTTACCAATTACTCACCCATCACCATCTCGATCAAGGCACAGAAACT TTTGATACCGATGTGGTAATCTTCGCCACGGGTTATCAGCAGGATCGACCGGCGTTTCTCGATCCATTAGCTGATCGTCT GCAAACCACCGCCGATTGCCAGTACCAAGTGGCTCCAGATTTTGTCCTCGACTGGCAAGGCCCGCGTGAAAACTGCTTGT TCGCCGTGAATGCCGGTATGCATAGCCACGGCATTGCCGAACCTCAGCTCAGCCTGATGGCTTGGCGATCAGCACATATT CTCAACCGGGCTTTAGGGCGCACTCAGTTCGATTTAACTTCCACCCCGGCGGTGATCCAATGGCGCAGCCAACAGTCGGG TGTCCCTGCCCACCCGGAACATCCCGTGCTCAACTGCATCGACATTTAA Protein sequence : MNQPLDFIGIGIGPFNLSIAALGSEVSGFNSKFLERKPHFSWHPGMMVPDCHMQTCFLKDLVSTVSPTNTYSFLNYLVQH KKFYRFLTTEHRTVSREEFADYLRWAASGMSSLEFSQDIQSVDFDDQQRHFVVTTPRNVYHARHVCLGIGKRIKLPDCVT EQNDRCFHASEMALRNPDLTGKRVTIVGGGQSGADLFLNIFLAAWGQPKQLNWISRRNNYNALDEAAFANEYFMPEYVES FYTLNDSAKQHMLAEQRMTSDGITSESLLAIYRAMYHQFEVLHEKPWARLLPSRSLTNMHTRGNGYQLLTHHHLDQGTET FDTDVVIFATGYQQDRPAFLDPLADRLQTTADCQYQVAPDFVLDWQGPRENCLFAVNAGMHSHGIAEPQLSLMAWRSAHI LNRALGRTQFDLTSTPAVIQWRSQQSGVPAHPEHPVLNCIDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucD | AAD44749.1 | IucD | Virulence | SHI-2 | Protein | 1e-136 | 60 |
| iucD | AAK71634.1 | IucD | Virulence | SHI-3 | Protein | 5e-137 | 60 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 2e-136 | 60 |
| iucD | NP_709457.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 2e-136 | 60 |
| iucD | YP_002414043.1 | L-lysine 6-monooxygenase | Virulence | Not named | Protein | 9e-137 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iucD | NP_670683.1 | lysine: N6-hydroxylase | VFG1084 | Protein | 3e-137 | 60 |
| iucD | NP_670683.1 | lysine: N6-hydroxylase | VFG0937 | Protein | 4e-137 | 60 |
| iucD | NP_670683.1 | lysine: N6-hydroxylase | VFG0618 | Protein | 8e-137 | 60 |
