Gene Information

Name : y3260 (y3260)
Accession : NP_670559.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3594045 - 3594245 bp
Length : 201 bp
Strand : +
Note : residues 6 to 62 of 66 are 59.64 pct identical to residues 8 to 64 of 68 from GenPept : >gb|AAG57758.1|AE005493_11 (AE005493) DNA binding protein [Escherichia coli O157:H7 EDL933]

DNA sequence :
ATGACCTATTCATCATTAATCCGATTGCCAGAAGTATTAAAACGTACCGGTTTTAGCCGGCCTTGGGTTTATAAATTATT
AAAACAAAAGCGCTTCCCGCCACCGATAAAAATAGGGGGGCGGGCTATCGCTTTTGTTGAAAGTGAGGTGAATGACTGGA
TTGAACAGCAAATTGCACATTCACGGGGAAATAAGCAATGA

Protein sequence :
MTYSSLIRLPEVLKRTGFSRPWVYKLLKQKRFPPPIKIGGRAIAFVESEVNDWIEQQIAHSRGNKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 50
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-10 50
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 8e-11 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
y3260 NP_670559.1 hypothetical protein VFG1141 Protein 4e-11 50