Gene Information

Name : hofG (y3201)
Accession : NP_670500.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3520555 - 3520992 bp
Length : 438 bp
Strand : -
Note : residues 2 to 137 of 145 are 63.97 pct identical to residues 3 to 138 of 145 from E. coli K12 : B3328; residues 5 to 137 of 145 are 69.92 pct identical to residues 19 to 151 of 156 from GenPept : >emb|CAA49648.1| (X70049) outG [Pectobacterium carotovorum]

DNA sequence : 
ATGGCAAACAAAAAAACAAAAGGATTTACATTGTTGGAAATTATGGTGGTTATTGTTATTCTGGGCCTACTTGCTAGCTT
AACAATACCCAGTCTGATGTCTAATAAAAATAGGGCGGACCAACAGAAAGCAGTAAGTGATATTAGTGCGCTGGAAAATG
CATTAGATATGTATAGATTAGATAACGGGGATTATCCGACCGAGCAGCAAGGCATTGCTGCTTTAGTAACTAAACCCAAC
GTTCCCCCATTACCGCAGAGATATCCATCCGATGGTTATATCCGGCGTTTACCAACAGATCCATGGGGGAATTCTTACCA
AATGAATAACCCAGGAAAACATGGCCAGATAGATATATTTTCAATAGGACCTGATAGGTTACCGGAAACTGAGGATGATA
TTGGTAATTGGATTACTTTATCTATCAGTGAGACATAG

Protein sequence : 
MANKKTKGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYPTEQQGIAALVTKPN
VPPLPQRYPSDGYIRRLPTDPWGNSYQMNNPGKHGQIDIFSIGPDRLPETEDDIGNWITLSISET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-35 57
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-35 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hofG NP_670500.1 general secretion pathway protein G VFG2050 Protein 4e-36 57
hofG NP_670500.1 general secretion pathway protein G VFG0180 Protein 3e-30 49
hofG NP_670500.1 general secretion pathway protein G VFG1871 Protein 5e-28 47