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Name : gabD (y2894) Accession : NP_670194.1 Strain : Yersinia pestis KIM Genome accession: NC_004088 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3197783 - 3199279 bp Length : 1497 bp Strand : - Note : NADP-dependent activity; residues 24 to 490 of 498 are 43.49 pct identical to residues 15 to 478 of 482 from E. coli K12 : B2661; residues 23 to 490 of 498 are 44.46 pct identical to residues 14 to 478 of 482 from GenPept : >gb|AAL21676.1| (AE008827) succ DNA sequence : ATGAGTGAGTATCATGAAAAAAATAATGCACTCTTCAAGTCGATTACCGCGTTAGACGGCGCTTTATTTATCAATGGTGA GTTCCGCAAAGGCGCGGGGGGGCGTCTGCCAGTGGAAAACCCGGCTACCGGCAAAGTGATCGGTCATCTCGCGGCGGCTA CTCCAGAGGAGATCGAAGAGGCGGTTGCTGCGGCGCGTCGCGCTTTTCCTGCCTGGGCCGCCGAACGGCCAAAGGCCCGA GCGAATGCGTTGCACCGTTTGGGTGATTTGATCGCCGGCGATGCCCTGAATATGGCGCGGAACATGACCATCGAACAGGG CAAGCCGGTTAACGAAGCGCAAGGTGAAATACTGAAGCTCGCCGAAATTTGTCATTTTTATGGCGAAGAAGCGACTCGCG TGCAAGGTGACGTTGTGCCGAATGACCCTCCGGGTTTTCAAAGTCTTGTCGTGCGAGAACCGGTTGGGGTGGTGGGGGCG ATTACCCCTTGGAATTACCCGGCCGAACTGGTGGGATGGAAGCTGTGCGCCAGCCTTGCCGCAGGCTGTACCCTCATTAT CAAACCTGCTGAACTGACACCCTACACGGCGCTGGCCATCGCTGAAAAATGCCTTGAAGCGGGTATTCCTGCCGGTGTCG TCAATGTGTTGACGGGGAAGGGGGAACAGGTTGGGCAGGCGCTGGTTGAACATCCACAGGTCGATAAAATAGCCTTTACT GGTTCCAGCGCGGTCGGTTTGCATATCCAGCAAAGTTGCCCGCAGGTTAAGCGGTTGTCGCTCGAACTCGGCGGCAATGG TCCGATGGTGGTGACCGCCTGCGCAGATGTGGCTGCCGCAGTTAAGGGCGCGGTGCGTCGTAGCTTCCGCAACTGTGGGC AGGTCTGCATTGCGATCAATCGTATTTATGTCCACCGCTCATGCTATCGGGCGTTTGTGAGCAAAATGGGGGTGGCCACC AATGGGTTGCGCCTTGGCAATGGGTTGGACGATCCAGCGGCGGACTTGGGTGCGATGGCCTCTGTAGAGCCACTGAACAA AACGCGTGCGCACCTTGAGGATGCTCTGGCAAAGGGGGCGCGCTTGGTTGCGGGGGGGAAAGCACCAGAGGGGGTGGAAT ATGCCAAGGGCCATTTCTTCCGTCCGACTGTGCTGGCCGACTGCACACACCAAATGCGCGTCATGACCGAAGAGACGTTT GGCCCGCTGGTCGGCTTAGCCCCTTTCGATGATATCGATGAAGTGATTAGTCGAGCGAATGATACTCCCTATGGGCTGGC AGCTTACGTTTATGCACGAGATCTGGCGGCTATCCACCGGCTGTCAGCGGCGTTGGACTACGGCAATGTGGCAATCAATA ACGTCGATGCCAGCATGATGAATGCGCCCTATGGGGGGCGTAAGCAAAGTGGTGTGGGCTACGAGCATGGCCGTGAGGGG TTGCTGGAGTATTTCAATTTCAAGCACATCCGCTTGTACCACGGTATCGGGGACTAA Protein sequence : MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEEAVAAARRAFPAWAAERPKAR ANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKLAEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGA ITPWNYPAELVGWKLCASLAAGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAINRIYVHRSCYRAFVSKMGVAT NGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGARLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETF GPLVGLAPFDDIDEVISRANDTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG LLEYFNFKHIRLYHGIGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-67 | 43 |
