Gene Information

Name : y0280 (y0280)
Accession : NP_667621.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 300534 - 301631 bp
Length : 1098 bp
Strand : -
Note : residues 44 to 363 of 365 are 57.89 pct identical to residues 37 to 358 of 360 from GenPept : >gb|AAG54528.1|AE005198_9 (AE005198) Z0259 gene product [Escherichia coli O157:H7 EDL933]

DNA sequence :
ATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAAGTGTGGTTGAGGATGTAAGTGGGGTTGAGAATGT
AAATGGGGTTGAGGCAAGACCCGAAGGGCAGGCATTGGATGTTTCACGTTATAACTTTTTTCAATTGGTCGAATTGCTCA
ACCAATTGGCGGTAGCGTGGCAAGGTGCGGCCCCTGTGGCGACCCCAGCCAATGAAGCCATCCGTTTTAAATCGACCGCC
AGTTTAGCATTCCCGACCAGAGATGTGATCGCACTGGACACCTCCGCCCGAGGTCAATTTGAGTTAGAGGTCTCTTTCCT
TGGATTGCATGGCAGCCAATCGCCGCTACCAGGATATTACCTCGATTCGTTAGCGTGGGAGGATGCGCAGAATGAGAACC
GGCTAACGGATTTCATGAACGTATTCAACCACCGCCTGTTAACGCTACTGCATCAGATTTGGCGTAAATACCGTTACTAC
ATCTGCTTTGACAATGGCGGTGATGATGCATTTTCACAACGCATGTTCTCGCTGGTGGGGTTAGGTAGCGAGGTCGTCCG
CAATAAATTGCAGATCAATCACAGCAAAATGCTGGCTTATGCAGGGCTGCTGGCCAGCCCCGGCAGAGCACCTGAAGTGA
TTTGCAGCCTTGTCTCACATTGCTTCAATTTGCCAGATATCACCTTACACAGTTGGCAGCTACGCAAAGTGGATATTGCC
CCCTCACAGCAGAATCGCTTGGGGACGAGGGTGAAAGTCCGTGGCAAGAAATATGATGAAAAATCAGTGCTTGGCGTTAA
TTTCTCCATCGGTTCACGGGTTGCGGATCGTAGCGGGAAATTCTTGTTGTGCATCAATAAGCTGACGCGAGAACAGTTCT
TATCCTTTTTACCCAACGGGGCTAATTACGCCTCGTTAGTGATGTTTGTCGCCTTCATTATGCGCGATCAATTCGCGTGG
GATTTACGCCTTGGGTTGGCCGAGCAACAGGTGGGCGGGATGGTGTTGGGAACCGAGCAAAATAGCCTATTGGGCTGGAC
CAGTATCCTCGGCGATCCCGAACAGAAACCCAGCGTAACGATTGGTGTAATGGAATAA

Protein sequence :
MLRMAGTDRSTCTDVSVVEDVSGVENVNGVEARPEGQALDVSRYNFFQLVELLNQLAVAWQGAAPVATPANEAIRFKSTA
SLAFPTRDVIALDTSARGQFELEVSFLGLHGSQSPLPGYYLDSLAWEDAQNENRLTDFMNVFNHRLLTLLHQIWRKYRYY
ICFDNGGDDAFSQRMFSLVGLGSEVVRNKLQINHSKMLAYAGLLASPGRAPEVICSLVSHCFNLPDITLHSWQLRKVDIA
PSQQNRLGTRVKVRGKKYDEKSVLGVNFSIGSRVADRSGKFLLCINKLTREQFLSFLPNGANYASLVMFVAFIMRDQFAW
DLRLGLAEQQVGGMVLGTEQNSLLGWTSILGDPEQKPSVTIGVME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec22 YP_851423.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-91 57
aec22 AAQ96716.1 Aec22 Not tested AGI-1 Protein 3e-91 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
y0280 NP_667621.1 hypothetical protein VFG2079 Protein 7e-62 41