Gene Information

Name : ssuB (y0242)
Accession : NP_667585.2
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 257961 - 258776 bp
Length : 816 bp
Strand : -
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease

DNA sequence :
ATGACCACACTGACTCATATCCCGCAAGGGACGCCAATAACGTTGGAGTCGATCGGCAAACGTTATGGTAATCGTACTGT
TTTAGATAATCTGCAACTGCGTATCACCGCAGGACAATTTGTGGCAGTGGTTGGCCGCAGCGGCTGTGGAAAAAGTACGT
TGTTACGTTTGCTCGCGGGGTTGGAAGCGGCCAGTGACGGAACACTGCTAAGTGGTAATGCTCTGCTCAGTCATGCCAAG
GATGAGACTCGTCTGATGTTTCAGGAGGCTCGTTTGCTCCCGTGGAAAAAGGTGATTGATAACGTGGGGCTGGGCTTGCG
TGGCCACTGGCGTGATGAAGCGTTGCAGGTATTGGACACCGTCGGGCTGGCAGATCGCGCCAATGAATGGCCCGCGGCAT
TATCAGGCGGACAAAAGCAACGTGTTGCACTGGCGCGGGCGCTGATCCATCGCCCCCGTTTATTGTTGTTGGATGAACCG
CTGGGCGCGTTGGATGCGTTGACCCGTATTGAGATGCAGGGCCTGATTGAACGTCTCTGGCAACAGCATGGTTTCACCGT
ATTGTTGGTGACGCATGACGTGAGTGAAGCTATCGCACTGGCGGATCGCGTGCTGTTGATTGAGGAGGGGCGTATTGGTT
TGGATCTGGCTATCGATTTGCCGCGCCCACGTCGCAAAGGATCGGCGAAGCTGGCCGCGCTGGAGGCCGAGGTGTTGGAA
AGAGTCTTGTCACCCCCCCAAGGCATTGAGGCATCACGCCAAGGCATTAAAGCGTCACGCCAAGGTACAGCAACATCACG
GCGGGTGGCGAATTGA

Protein sequence :
MTTLTHIPQGTPITLESIGKRYGNRTVLDNLQLRITAGQFVAVVGRSGCGKSTLLRLLAGLEAASDGTLLSGNALLSHAK
DETRLMFQEARLLPWKKVIDNVGLGLRGHWRDEALQVLDTVGLADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEP
LGALDALTRIEMQGLIERLWQQHGFTVLLVTHDVSEAIALADRVLLIEEGRIGLDLAIDLPRPRRKGSAKLAALEAEVLE
RVLSPPQGIEASRQGIKASRQGTATSRRVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-33 49