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Name : y2078 (y2078) Accession : NP_669391.1 Strain : Yersinia pestis KIM Genome accession: NC_004088 Putative virulence/resistance : Unknown Product : transport protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 2289459 - 2290769 bp Length : 1311 bp Strand : + Note : residues 18 to 435 of 436 are 60.28 pct identical to residues 24 to 441 of 442 from GenPept : >emb|CAD16059.1| (AL646069) probable permease transmembrane protein [Ralstonia solanacearum] DNA sequence : ATGTCTGAATCATCCACTGAATCTTTGTCGCAACCGACGCAGTTACAAGAAGAAAATAATGCCTACCGTAAAACGGTATG GCATCTCTTGCCGCTACTGATGTTGTGTTACGTTCTCAACTACTTAGATCGGGTTAATGTTGGTTTTGCCAAGCTCCAAA TGGCCGATGACTTGCAATTCTCGGATACGGTTTATGGCTTGGGGGCCGGTATGTTCTTTATCGGCTACTTTTTCCTGGAA ATTCCCAGCAACCTGATACTGCATCGAGTTGGCGCAAGGTTGTGGATTGCGCGGATCATGATCACTTGGGGGATTATCTC TGCCTGTATGGCATTTGTGACGACGCCGATGTCATTTTATGTGATGCGATTCTTACTCGGGGTTGCTGAAGCAGGTTTTT TCCCAGGGATTATTCTTTATATTTCATATTGGTTTCCGTCTCACCGCCGTGGCCGCGTGTATGGATTATTCGTCATCTCG GTACCGTTATCCGGCATCATAGGGGCACCACTGTCCGGCTGGATCATGCAGTATTTTAATGGTTTCCAAGGTTATGCTGG CTGGCAATGGATGTTTATTCTGGAAGGTATTCCTTCCGTATTGGTGGGTATTTTAATCATTTATAAACTGAAAGATCGAA TCACACATGCCACCTGGCTGACCGACAAAGAGAAAGATATCTTACAGACCAATATAGAGAACGAAGCTGCGCATTATGCA CATAGCCGCCTGAGAGATGCCTTTTTGCAACCGCGAGTCTGGCTATTAACCCTTATTTATTTCTGTCTGATCAGCGGCTT TTATACTATCGGTTTCTGGCTACCGACGTTGATTAGAGACAGTGGGGTAAAGGATATTTTAAGTATTGGTTTCTTAACCG CCATTCCTTCTGCAGCGGCAGCGGTGACCATGATCGTCGTCTCGCGCAGTGCTGACCGTTTGCGGGAGCGACGCTGGCAT CTGGCACTAACCGCGGTATTGGGTGCAGTGGGTATTATTCTCTCAACCTATTTTAGCGACAATATCGTTGTTGCGATGGT GTGCTTAACCATTGGTGCTATGGGGGCGCTGAGTACGATACCGCTGTTCTGGAGCTTGCCCACCGCTTTCCTTGGCGGAA GTGCGGCTGCAGCAGGTATCGCCTTTATTAACTCTTGGGGCAATCTGGGCGGATTTGTTGCGCCTTATATGATGGGATAC CTGAAAGACTTGACCCAGAGTACCACGACCGGAATGTTGATCATTTCTACCACGCTATTTATTGGTGCCGCGCTGGTGTT TTTGATCCCGGCCAAGGCAGTTAATCATTAA Protein sequence : MSESSTESLSQPTQLQEENNAYRKTVWHLLPLLMLCYVLNYLDRVNVGFAKLQMADDLQFSDTVYGLGAGMFFIGYFFLE IPSNLILHRVGARLWIARIMITWGIISACMAFVTTPMSFYVMRFLLGVAEAGFFPGIILYISYWFPSHRRGRVYGLFVIS VPLSGIIGAPLSGWIMQYFNGFQGYAGWQWMFILEGIPSVLVGILIIYKLKDRITHATWLTDKEKDILQTNIENEAAHYA HSRLRDAFLQPRVWLLTLIYFCLISGFYTIGFWLPTLIRDSGVKDILSIGFLTAIPSAAAAVTMIVVSRSADRLRERRWH LALTAVLGAVGIILSTYFSDNIVVAMVCLTIGAMGALSTIPLFWSLPTAFLGGSAAAAGIAFINSWGNLGGFVAPYMMGY LKDLTQSTTTGMLIISTTLFIGAALVFLIPAKAVNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-106 | 56 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-106 | 56 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-109 | 56 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-106 | 56 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-106 | 56 |
