Gene Information

Name : y2038 (y2038)
Accession : NP_669353.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 2246451 - 2247575 bp
Length : 1125 bp
Strand : -
Note : IS285; residues 1 to 374 of 374 are 100.00 pct identical to residues 29 to 402 of 402 from GenPept : >gb|AAC13227.1| (AF053947) transposase [Yersinia pestis]

DNA sequence :
ATGCTAACAAAGCTTACCGTCGAAACAGCGTTAAATGCAGAGCTTACCGAACACCTCGGGCACGAGAAAAATACCCCTAA
ATCAGGCTCGAATACCCGCAACGGCTATTCGTCCAAAACACTGCTATGCGACGACGGCGAAATCGAGCTGAATACGCCAC
GCGACCGCGAAAACACCTTTGAACCGCAGCTGATAAAGAAAAATCAGACGCGTATCACACAGATGGACAGCCAGATTTTG
TCCCTGTACGCCAAAGGCATGACCACCCGCGAAATCGTCGCCACCTTCAAAGAGATGTATGACGCCGATGTGTCTCCCAC
GCTGATATCTAAAGTCACCGATGCCGTAAAAGAGCAGGTTGCTGAATGGCAAAACCGCCAACTGGATGCTCTGTATCCCA
TTGTTTATATGGACTGCATTGTCGTAAAAGTCCGCCAGAACGGTAGCGTGATAAACAAAGCAGTGTTCCTAGCGCTGGGC
ATCAACACTGAAGGTCAGAAAGAGCTGCTGGGCATGTGGCTGGCAGAAAATGAAGGTGCGAAGTTCTGGCTAAGTGTGCT
GACAGAGCTGAAAAATCGCGGTCTTCAGGACATTCTGATTGCCTGCGTGGATGGCCTGAAGGGGTTCCCGGATGCGATAA
ACAGTGTTTATCCGCAGACTCACATCCAGCTGTGCATCATCCATATGGTACGCAACAGCCTGAAATATGTGTCATGGAAG
GACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACAGAAGAGGCGGCGCTGATGGCGCTGGATAA
GTTTGCGGAGGCCTGGGACGACAAATACCCGCAAATTAGCAAAAGTTGGCGTACGCACTGGGAAAATCTCAATACATTCT
TCGGCTATCCGCCCGATATCCGCAAGGCTATCTACACCACGAATGCCATCGAATCGGTGAACAGCGTGATCCGTGCAGCC
ATTAAAAAGCGCAAAGTGTTCCCGACAGACGACTCAGTGCGGAAGGTTGTTTATTTGGCGATCAAGGATGCATCAAAAAA
ATGGAGTATGCCGATCCAGAACTGGCGGTTAGCGATGAGCCGTTTTATTATCGAGTTCGGTGACCGCCTGAGCGATCACC
TTTAA

Protein sequence :
MLTKLTVETALNAELTEHLGHEKNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRITQMDSQIL
SLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALG
INTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSLKYVSWK
DYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAA
IKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 4e-175 99
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 3e-88 48