Gene Information

Name : y0180 (y0180)
Accession : NP_667523.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Unknown
Product : DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 184581 - 185492 bp
Length : 912 bp
Strand : +
Note : residues 1 to 301 of 303 are 80.73 pct identical to residues 1 to 301 of 309 from E. coli K12 : B3243

DNA sequence :
ATGGAAAGATTAAAACAGATGTCTGTTTTTGCGAAGGTGGTGGAGTGCGGCTCTTTTACTGCCGCAGCACGACGACTGGA
GAACAGTGTCTCTTCCATCAGCCAAACGGTATCAAAACTGGAAAATGAGCTTAACGTTAAGCTACTAAATCGTAGTACTC
GCCGCATTGGCTTAACGGAAGCGGGCCGGATTTATTACCAAGGCTGCCGGCGTATGTTGCAGGAGGTGCAGCAAGTTCAC
GAACAATTGTATGCTTTTAATAATACCCCAACCGGCACATTACGCATTGGTTGCTCCTCCACCATGGCACAAAATGTGCT
GGCCACCATGACAGCCGATATGCTCAAAGCCTATCCCGGTTTATCAGTGAATCTGGTTGCCGGTATTCCTGCACCGGATC
TGATAGCTGATGGCCTGGATGTGGTGATCCGCGTCGGTGCCTTGCAAAACTCAGGGCTGTTTTCGCGCCGCCTCGGTGCT
ATGCCTATGGTGGTGTGTGCAGCAAAAAGTTATTTGTCACAATATGGCACGCCAGCAAAACCCAGTGACATGGCCAATTT
TTCCTGGTTGGAGTATAACGTCCGCCCAGATAGCAATTTTGAGCTGATCGCACCAGAAGGTATCACCACCCAAATATCAC
CGCAGGGCCGTTTTGTCACCAATGACTCACAAACCATGATCCGTTGGTTAAAGGCCGGGGCGGGTATCGCCTATACCCCC
TTAATGTGGGTGATTGAAGAAATTAAACGTGGTGAGGTTGAGATTCTATTTAAACACTATCACTCAGACCCGCGTCCGGT
ATATGCGCTTTATACTGAAAAAGATAAAATGCCACTGAAAGTTCAGGTCTGCATTGATTATTTGACCGAGTATTTCAAAC
GGGTAGCTGATGTTTATCAGGATTATCGCTAA

Protein sequence :
MERLKQMSVFAKVVECGSFTAAARRLENSVSSISQTVSKLENELNVKLLNRSTRRIGLTEAGRIYYQGCRRMLQEVQQVH
EQLYAFNNTPTGTLRIGCSSTMAQNVLATMTADMLKAYPGLSVNLVAGIPAPDLIADGLDVVIRVGALQNSGLFSRRLGA
MPMVVCAAKSYLSQYGTPAKPSDMANFSWLEYNVRPDSNFELIAPEGITTQISPQGRFVTNDSQTMIRWLKAGAGIAYTP
LMWVIEEIKRGEVEILFKHYHSDPRPVYALYTEKDKMPLKVQVCIDYLTEYFKRVADVYQDYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 2e-130 93