|
Name : y0149 (y0149) Accession : NP_667491.1 Strain : Yersinia pestis KIM Genome accession: NC_004088 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 158459 - 159532 bp Length : 1074 bp Strand : + Note : residues 30 to 357 of 357 are 77.43 pct identical to residues 1 to 328 of 328 from E. coli K12 : B3197; residues 30 to 357 of 357 are 78.65 pct identical to residues 1 to 328 of 328 from GenPept : >gb|AAL22184.1| (AE008852) polysialic acid capsule express DNA sequence : ATGCTCAGGAAGGCTTGGAGCGAAAGCAACCAACACACCTACAGCGTGAAAGATGACGGTAATACCAACATTGGGCGGAT ATTAAGTATGTCTACTTTTGATTTACAGCCGGGCGTGGATTTCCAGCAGGCAGGTAAGCAGGTACTTCAGATTGAACGCG AAGGGCTGGCTCAACTCGATCAATACATAAACGAGGATTTCTCCAGAGCCTGTGAGGCCATTTTTCGTTGCCACGGCAAA GTCGTCGTGATGGGAATGGGCAAATCTGGTCATATTGGCTGCAAAATTGCAGCCACATTCGCCAGCACGGGCACACCTGC ATTTTTTGTCCATCCTGGTGAAGCCAGCCATGGCGATTTGGGCATGATCACGCCACAAGATATTGTATTAGCTATCTCTA ACTCTGGGGAATCCAACGAAATCCTCACGTTGATCCCCGTGCTTAAGCGCCAGAAAATTCTGTTGATTTGCATGAGCAGT AACCCTGAGAGCACCATGGGTAAAGCGGCCGATATTCACTTGTGCATTAATGTGCCACAAGAGGCCTGTCCGCTGGGGCT AGCGCCAACCACCAGTACGACTGCAACACTGGTTATGGGGGATGCGTTGGCGGTAGCCTTGCTCAAAGCACGGGGTTTCA CGCAGGAAGATTTCGCACTCTCTCACCCAGGTGGCGCGCTGGGGCGTAAGTTGCTGCTGCGGATCAGCGATATTATGCAT ACGGGTACGGAGATCCCCACCGTCAGCCCTGATGCATCATTACGTGATGCCTTGCTAGAAATTACTCGGAAAAGTCTGGG TTTGACCGTTATTTGTGACGATTCAATGAGGATTAAAGGTATCTTTACCGACGGTGACTTGCGCCGGGTATTTGATATGG GCATTGATCTGAATAATGCAAAAATTGCTGACGTCATGACTCGCGGGGGTATTCGAGTCCCTCCGAACATATTGGCGGTG GACGCGCTCAATCTGATGGAGTCACGCCATATCACTGCGTTGCTCGTCGCTGATGGTGACCAATTACTGGGTGTCGTACA TATGCACGATATGCTGAGAGCCGGTGTTGTCTGA Protein sequence : MLRKAWSESNQHTYSVKDDGNTNIGRILSMSTFDLQPGVDFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGK VVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSS NPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRISDIMH TGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAV DALNLMESRHITALLVADGDQLLGVVHMHDMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-50 | 43 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-51 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-51 | 43 |
