Gene Information

Name : phoB (y0978)
Accession : NP_668308.1
Strain : Yersinia pestis KIM
Genome accession: NC_004088
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1107191 - 1107910 bp
Length : 720 bp
Strand : +
Note : sensor is PhoR (or CreC); residues 11 to 239 of 239 are 89.95 pct identical to residues 1 to 229 of 229 from E. coli K12 : B0399; residues 11 to 239 of 239 are 90.39 pct identical to residues 1 to 229 of 229 from GenPept : >gb|AAL19351.1| (AE008714) respo

DNA sequence : 
GTGACCGCTAACATACTGGCAGGGTTGATGATGGCAAGACGCATACTGGTGGTGGAAGATGAAGCACCAATCCGTGAGAT
GGTGTGCTTTGTGTTGGAGCAAAATGGCTACCAACCGTTAGAAGCCGAAGATTATGACAGCGCGGTAGCTCGCCTGTCGG
AGCCTTTTCCTGATTTAGTGCTGTTAGACTGGATGTTACCCGGCGGCTCGGGTATTCAGTTTATTAAACATATGAAACGT
GAAGCTTTGACCCGGGATATTCCGGTGATGATGCTGACCGCTCGTGGCGAAGAAGAAGATCGTGTGCGCGGTTTGGAAGT
GGGCGCAGATGATTATATTACCAAGCCTTTTTCACCTAAAGAGCTGGTAGCGCGGATCAAAGCGGTAATGCGGCGGATAT
CGCCAATGGCCGTTGAAGAAGTGATTGAAATGCAAGGGTTGAGCCTTGACCCTTCATCTCACAGGGTAATGGCGAATGAT
CAGGCGCTAGATATGGGGCCGACCGAGTTTAAATTATTACACTTCTTTATGACTCATCCCGAGCGTGTTTATAGCCGTGA
ACAGTTGCTTAATTATGTTTGGGGCACTAACGTTTATGTAGAAGATCGTACGGTTGATGTGCATATTCGTCGGTTACGCA
AGGCGCTTGAAACTGATGGTCACGATAAAATGGTACAAACTGTCCGGGGAACTGGATACCGTTTCTCAACGCGCTACTGA

Protein sequence : 
MTANILAGLMMARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVARLSEPFPDLVLLDWMLPGGSGIQFIKHMKR
EALTRDIPVMMLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMAND
QALDMGPTEFKLLHFFMTHPERVYSREQLLNYVWGTNVYVEDRTVDVHIRRLRKALETDGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-34 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-31 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein HE999704.1.gene2815. Protein 5e-39 44
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein CP001918.1.gene5135. Protein 3e-24 42
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein CP001138.1.gene2239. Protein 2e-33 41
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein BAC0596 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein VFG1563 Protein 3e-34 41
phoB NP_668308.1 phosphate regulon transcriptional regulatory protein VFG1702 Protein 3e-34 41