Gene Information

Name : fliI (BUsg070)
Accession : NP_660429.2
Strain : Buchnera aphidicola Sg
Genome accession: NC_004061
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 80868 - 82235 bp
Length : 1368 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAATGAAATTAAGATTTTCTGAATTATTAAATAATATTTCTTCTTTCGAAAAGAAAGTTAATAATCTTTCTGATAT
TTTTTCTTATGGTTGTCTTATTAGTGTTAATGGTTTACTTTTAGAAGTGATTGGGTTGACGGCACCAATTGGATCTCGAT
GTTATGTTGAAAGAATAATAGATGGTAAAATTTTAAATATCAGTGCTGAAGTAGTCGGTTTTAAAAAAGAAAAAACATTG
TTATTTTCTCTTGAAGAAACATATGGTGTTTTCCCTGGTACCCGAGTGTTTTTAAAATGTTTTAAAAATACATATTCTAT
TACAGGAAAAATTCCATTATCAACAGAGCTATTGGGTAGAGTACTCGATAGTAAAGGTAGACCTTTAGACGGACGTTCTC
AATTAAATCCCAAATTTTTTACCTTTTTAAAAAGTAATGTTGTTAATCCATTAAATAGAAAACCAATTACTGAAGTGTTA
GATACTGGAATACGTGCTATAAATGCTCTTATAACTGTAGGAAGAGGTCAAAGAATAGGAATTTTTTCCAGTTCAGGTCT
TGGAAAAAGTATTCTATTAGGTATGATGGCAAAATATACAAAAGCAGATGTAGTTATTATTGGTTTAATTGGAGAACGAG
GGCGGGAAGTAAAAGATTTTATAGAAAATATACTGGGTTCAAATGGATTGTCTCGATCTGTAGTAATTGCTGCTCCTGCT
GATGTTTCTCCTTTATTGCAAATAGAAGCTGCATCGTATGCTACAAGCATAGCTGAATATTTTCGTAAAAAAAATAAACA
TGTATTATTGATTATGGATTCCTTAACTCGTTATGCTATGGCACAAAGAGCTGTTTCATTATCGTTAGGAGAACTACCTG
TCTCTAAGGGGTATCCATCTTCTGTTTTTTCGAAAATTCCTATTTTAGTAGAACGCACAGGAAATACAGATAATTATGGT
TCTATTACCTCGTTTTATACAGTATTAACTGAAAGTGAAGAAGATCCGCAGGATCCAATTGCTCACATTTGTCGTTCTAT
ATTAGACGGGCATATTGTATTATCTCGGCATTATGCTGAATTAGGGCATTATCCAGCAATTGATATTGAAAATTCTATTA
GTCGCGTAATGCCTAATATTATTAGCAAAAAACAATATTCTCAAGCTTGTTATTTTAAAAAATTAATTGCTTCTTATCAA
AGAAATAGAGATTTAATTAATATTGGTGCTTATTTAAAAGGAACTGATTCAACTTTAGATCATGCTATTAAGATATGGCC
TATCTTAGAAAGATTTTTACAGCAGAAGCAATCAGAAAAAAGTAGTTATTTATCTTCTTGCGAAGAATTAAATCAAATAT
TTATTTAA

Protein sequence : 
MLMKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLTAPIGSRCYVERIIDGKILNISAEVVGFKKEKTL
LFSLEETYGVFPGTRVFLKCFKNTYSITGKIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTFLKSNVVNPLNRKPITEVL
DTGIRAINALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIAAPA
DVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKGYPSSVFSKIPILVERTGNTDNYG
SITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQ
RNRDLINIGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQIFI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-55 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-56 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-55 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-55 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-55 45
escN AAC38383.1 EscN Virulence LEE Protein 8e-59 44
escN AAC31513.1 L0034 Virulence LEE Protein 4e-59 44
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-57 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-59 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-58 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-58 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 5e-59 44
escN AAK26715.1 EscN Virulence LEE Protein 1e-58 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 5e-59 44
escN AAL57542.1 EscN Virulence LEE Protein 1e-58 44
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-59 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-59 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-59 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-63 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-63 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-58 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-58 43
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-68 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-68 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-70 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-69 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-69 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-70 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-69 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-68 42
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-68 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-51 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 8e-54 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-49 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI NP_660429.2 flagellum-specific ATP synthase VFG2331 Protein 2e-112 56
fliI NP_660429.2 flagellum-specific ATP synthase VFG2499 Protein 4e-103 54
fliI NP_660429.2 flagellum-specific ATP synthase VFG1254 Protein 2e-97 49
fliI NP_660429.2 flagellum-specific ATP synthase VFG0515 Protein 5e-56 45
fliI NP_660429.2 flagellum-specific ATP synthase VFG0812 Protein 2e-59 44
fliI NP_660429.2 flagellum-specific ATP synthase VFG0730 Protein 5e-59 44
fliI NP_660429.2 flagellum-specific ATP synthase VFG0390 Protein 7e-66 43
fliI NP_660429.2 flagellum-specific ATP synthase VFG0192 Protein 2e-67 42
fliI NP_660429.2 flagellum-specific ATP synthase VFG2144 Protein 3e-64 41