Gene Information

Name : dnaB (BUsg528)
Accession : NP_660858.1
Strain : Buchnera aphidicola Sg
Genome accession: NC_004061
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 583185 - 584582 bp
Length : 1398 bp
Strand : +
Note : -

DNA sequence :
ATGGTATATCCAATATATATGGCAAAAAATAAATCATATTTACATCAAATTAATAGATTAAAAATTCCACCACATTCATT
AGAAGCAGAACAATCAGTATTAGGTGGATTAATGTTAGATAATGAACAATGGGATTCTGTTTCAGAACACGTAGTAGCTG
ATGATTTTTTTAGTAAACCACATCGTTTAATATTTCAAGAGATGCAACAATTATTAGATTTAGGACATCCTATTGATTTA
ATTACATTATCAGAATCGTTAGAACAAAAGGGAAAATTAGAAAGTGTAGGTAGATTTTCTTATTTAGCAGAATTATCAAA
AAACACTCCTAGCACAGCAAATATTATAGCATATGCTGATATAATACGCGAAAGAGCAATAGTAAGGGAAATGATATTAG
TAGCCAACAAAATAGCAAATGCTGGATATGATACTCAAGGGAGAAAAAGCGAAGAATTATTAGATTATGCAGAATCTAGT
GTATTTAAAATTGCCGAAAAACGTTTTAAAAAAGATTCAGGTCCCAAAAATATTGAACAAATTCTCGATGAAACTGTTAC
TAGTATTGAAAAATTATTTTTATCTCCTAATGATGGAGTAACAGGAATAAATACAGGATATCAAGATTTAAATAAAAAAA
CATCAGGTTTGCAGCCTTCAGAGCTTATTATTATTGCAGCAAGACCTTCAATGGGTAAAACAACTTTTGCAATGAACTTA
TGTGAAAATGCTGCTATGCTATATGATAAACCAGTATTAATTTTTAGTTTAGAAATGCCTGGAGAGCAAATCATGATGCG
TATGTTAGCATCTTTATCCAGAGTTAATCAGGCACGTATTCGAACAGGACAATTAAATGATGAAGATTGGTCTCGCATGT
CTGGTACTATCAATGTTTTACTTAAAAAAAAGAATATTTATATAGATGATTCTTCAGCTCTTACTCCTAGTGAAGTTCGT
TCTAGAGCACGTCGTATTTATCGTGAAAATAAGGGATTAACTTTAATAATGGTTGATTATTTACAACTAATGAGAGTTCC
ATCTCTTTCTGATAACAGAACTCTTGAAATTGCTGAAATTTCAAGAACTTTAAAAGCATTGGCAAAAGAATTACAAGTAC
CAGTTATAGCATTATCACAATTGAATCGTTCTTTAGAACAAAGATCAGATAAAAGACCAGTAAATTCAGATTTACGCGAA
TCTGGTTCTCTAGAACAAGATGCAGATTTAATAATGTTTATATATCGCGACGAAATATATCACGAAAACAGTGATTTTAA
AGGTGTGGCAGAGATTATAATAGGGAAACAAAGAAATGGACCAATTGGGACAATATGCTTAACATTTAACGGACACTGGT
CTAGATTTGATAATTATTGTGGTCCTAAATATGATTGA

Protein sequence :
MVYPIYMAKNKSYLHQINRLKIPPHSLEAEQSVLGGLMLDNEQWDSVSEHVVADDFFSKPHRLIFQEMQQLLDLGHPIDL
ITLSESLEQKGKLESVGRFSYLAELSKNTPSTANIIAYADIIRERAIVREMILVANKIANAGYDTQGRKSEELLDYAESS
VFKIAEKRFKKDSGPKNIEQILDETVTSIEKLFLSPNDGVTGINTGYQDLNKKTSGLQPSELIIIAARPSMGKTTFAMNL
CENAAMLYDKPVLIFSLEMPGEQIMMRMLASLSRVNQARIRTGQLNDEDWSRMSGTINVLLKKKNIYIDDSSALTPSEVR
SRARRIYRENKGLTLIMVDYLQLMRVPSLSDNRTLEIAEISRTLKALAKELQVPVIALSQLNRSLEQRSDKRPVNSDLRE
SGSLEQDADLIMFIYRDEIYHENSDFKGVAEIIIGKQRNGPIGTICLTFNGHWSRFDNYCGPKYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-95 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-97 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-97 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 6e-97 50
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-93 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-84 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-84 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 7e-79 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-76 43