Gene Information

Name : RHE_PD00330 (RHE_PD00330)
Accession : NP_660063.2
Strain :
Genome accession: NC_004041
Putative virulence/resistance : Unknown
Product : insertion sequence transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 344944 - 345210 bp
Length : 267 bp
Strand : -
Note : similar to mlr5946 [Mesorhizobium loti]; similar to entrez-protein:NP_106521.1 location:bacterial cytoplasm Psort-Score: 0.1697

DNA sequence :
ATGAAAGCGTCGCAGTTTTCGGACGCTCAGAAGGCGTTCATTCTGAAGCAAGGTGATGAAGGCGTGTCGGTTGCTGAAAT
CTGCAGGAAGGCGGGGATCAGCCAGGCGACTTATTTCAACTGGAAGAAAAAATACGCGGGCATGCTGCCACCGGAGATGA
AGAGGCTGAAACAGCTCGAGGACGAGAATTCGCGCCTGAAGAAGATCGTCGCGGATCTGACGCTGGACCGCGAGATGTTG
CAGGATGTCATCCGCCGAAAGCTCTAA

Protein sequence :
MKASQFSDAQKAFILKQGDEGVSVAEICRKAGISQATYFNWKKKYAGMLPPEMKRLKQLEDENSRLKKIVADLTLDREML
QDVIRRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-22 53
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 2e-22 53
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-16 49
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 4e-15 47
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-15 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-15 47
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-18 47