Gene Information

Name : RHE_PD00320 (RHE_PD00320)
Accession : NP_660073.1
Strain :
Genome accession: NC_004041
Putative virulence/resistance : Unknown
Product : insertion sequence transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337407 - 337673 bp
Length : 267 bp
Strand : +
Note : similar to mlr5946 [Mesorhizobium loti]; similar to entrez-protein:NP_106521.1 location:bacterial cytoplasm Psort-Score: 0.1566

DNA sequence :
ATGAAGGCATCGCAGTTTTCGGACGCTCAGAAGGCGTTCATTTTGAAGCAGGGTGATGAGGGCGTCTCGATCGCGGAGAT
TTGTCGCAAGGCGGGGATCAGTCAGACGACTTACTTCAACTGGAAGAAAAAGTACGCCGGCATGTTGCCGCCAGAGATGA
AGAGGCGCAAGCAGCTTGAGGACGGGAATTCGCGATTGAAGAAGATCGTCGCGGATCTGACGTTGGACCGTGAGATGCTG
CAGGACGCCATCCGCCGAAAGCTCTAG

Protein sequence :
MKASQFSDAQKAFILKQGDEGVSIAEICRKAGISQTTYFNWKKKYAGMLPPEMKRRKQLEDGNSRLKKIVADLTLDREML
QDAIRRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 8e-21 47
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-20 47
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-14 43
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-16 43
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-13 41
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-13 41
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-13 41