Gene Information

Name : RHE_PD00153 (RHE_PD00153)
Accession : NP_659884.1
Strain :
Genome accession: NC_004041
Putative virulence/resistance : Virulence
Product : transport secretion system IV, VirB11 protein
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 170474 - 171502 bp
Length : 1029 bp
Strand : +
Note : similar to virB11 (SMa1302) [Sinorhizobium meliloti]; location:bacterial cytoplasm Psort-Score: 0.3520

DNA sequence :
ATGACTGAAGCTGCCGACGCCGGCGTCGTGCGCGAACTGCTTTCGCCACTATCACGCTTCCTGCGCGACAAGACGCTCTA
TGAGGTCATCGTCAACCGGCCGGGACAGGTCGTCACGGAGGGGAGGGAGGGATGGCAGACCTATGAGATGCCCGAACTCT
CTTTCGACAGGTTGATGCGTCTCGCCCGCTCGGTCGCGAGCTTCTCCAATCAGTCGATCGACGAGACGCGACCGATCCTG
TCGGCGACCTTGCCGGACGATGAGCGGATCCAGATCGTCATCCCGCCGGCAACGACGAAGGGAACCGTGAGCATCACCAT
CCGCAAGCCGTCCTCCGTGTCGCTGACCCTCGAGGATCTCGATCATGGGGGATTGTTCGCCGATGTCTTGCCGGCCCAAG
ATGACGGGAGACGATCAGACCACAGGCTGTTGGAATACTATCGCATCGGCGCCTACAAGGCGTTTCTCCGGGAGGCGGTG
TTTGCAAGAAAGAACATCATCATCTCCGGCGCCACCGGGTCGGGAAAAACAACTCTATCGAAAGCGCTGATCCGCCACAT
TCCGCAAAGCGAGCGGATTATTTCGATCGAAGACACTCCCGAGCTGGTGGTCCCGCAACCCAACCATGTTCGGCTCTTCT
ATTCCAAAGGCGGTCAGGGCCTGGCGAAGGTCGGCGCGAAGGACCTGCTCGAATCCTGCCTGCGCATGCGGCCCGACCGC
ATCCTGCTGCAGGAATTGCGAGACGGAACCGCCTTCTACTACATCCGCAACGTCAACTCCGGCCATCCTGGCTCCATCAC
CACGGTCCATGCCGATTCCGCCCGCCTCGCCTTCGAGCAGCTGACATTGCTGGTCAAGGAGTCGGAGGGCGGCGGGGACC
TCGAACGGCACGACATCCGCGAGATGTTGACGATCGCGGTCGACGTCATCGTCCAATGCAAGCGGATCGACGGGCGGTTT
CGGGTGAGTGAGATCTACTATCGAGATGCCGCGACTGACCTCGGCCGCTCTTCGTCGGATCGAGCTTAA

Protein sequence :
MTEAADAGVVRELLSPLSRFLRDKTLYEVIVNRPGQVVTEGREGWQTYEMPELSFDRLMRLARSVASFSNQSIDETRPIL
SATLPDDERIQIVIPPATTKGTVSITIRKPSSVSLTLEDLDHGGLFADVLPAQDDGRRSDHRLLEYYRIGAYKAFLREAV
FARKNIIISGATGSGKTTLSKALIRHIPQSERIISIEDTPELVVPQPNHVRLFYSKGGQGLAKVGAKDLLESCLRMRPDR
ILLQELRDGTAFYYIRNVNSGHPGSITTVHADSARLAFEQLTLLVKESEGGGDLERHDIREMLTIAVDVIVQCKRIDGRF
RVSEIYYRDAATDLGRSSSDRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 8e-98 61
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 4e-92 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_PD00153 NP_659884.1 transport secretion system IV, VirB11 protein VFG2240 Protein 4e-98 65
RHE_PD00153 NP_659884.1 transport secretion system IV, VirB11 protein VFG2218 Protein 2e-59 48
RHE_PD00153 NP_659884.1 transport secretion system IV, VirB11 protein VFG0024 Protein 2e-51 43