Gene Information

Name : RHE_PD00150 (RHE_PD00150)
Accession : NP_659887.2
Strain :
Genome accession: NC_004041
Putative virulence/resistance : Virulence
Product : transport secretion system IV, VirB8 protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 167756 - 168427 bp
Length : 672 bp
Strand : +
Note : similar to virB8 (SMa1308) [Sinorhizobium meliloti]; location:bacterial inner membrane Psort-Score: 0.3845

DNA sequence :
ATGGTGACCACCGATAACCTCAAAAGTTACTTCGACAAGGCCCGCCGGTTCGATCAGGATCGGATGATCCAGGTCGAGCG
CTCTGCCCGCATCGCCTGGTTCGTCGCTGTTTGCGCCGGCACGCTTGCTGCCGTTTCCGTCTTTGCCATTGCCGGCCTCA
CGCCTTTGAAAACCGTCCAGCCCTTCGTCGTGCGGGTCGACAATTCCACAGGCATTGTTGACGTCGTCTCGGCGCTGACA
TCGACCGCCGGCACCTACGACGAGGCCGTCACCAAATATTTCGCGGCCAAATATGTCCGCGCCCGCGAGGGCTACGTCTG
GAGCGAGGGCGAGGAGAATTTCCGCACCGTCGCGTTGCTATCGACGCAGCCGGAACAGACTCGATTTGCCGCAGTCTACC
GCGGCAGCAATCCCGATTCCCCGCAAAACATTTATGGCCGCAGCGCCACGTCGCGGATCAACATTGTTTCCATCTCGCTG
ATCAACGCCAATGTGGCATCCGTCCGCTATATGAGGACCGTGACCCGCGGTGACGAGGTGCGCACCACGCACTGGGTTGC
GACCCTGACCTTCTCCTATGCCAACGCTCCGATGTCCTCGACCGACCGGCTGACCAATCCGCTCGGCTTCGTCGTCAGCG
AATATCGCGCCGATCCGGAGACCATCAATTGA

Protein sequence :
MVTTDNLKSYFDKARRFDQDRMIQVERSARIAWFVAVCAGTLAAVSVFAIAGLTPLKTVQPFVVRVDNSTGIVDVVSALT
STAGTYDEAVTKYFAAKYVRAREGYVWSEGEENFRTVALLSTQPEQTRFAAVYRGSNPDSPQNIYGRSATSRINIVSISL
INANVASVRYMRTVTRGDEVRTTHWVATLTFSYANAPMSSTDRLTNPLGFVVSEYRADPETIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 4e-46 52
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 8e-50 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_PD00150 NP_659887.2 transport secretion system IV, VirB8 protein VFG2237 Protein 1e-47 53