|
Name : RHE_PD00124 (RHE_PD00124) Accession : NP_659913.1 Strain : Genome accession: NC_004041 Putative virulence/resistance : Unknown Product : insertion sequence transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 138987 - 140519 bp Length : 1533 bp Strand : + Note : location:bacterial cytoplasm Psort-Score: 0.1334 Similar to entrez-protein:CAD31333.1 similar to msi301 [Mesorhizobium loti] DNA sequence : ATGTTGGACACCGCCGATTTCCCTGACGATATCGATGCCCTGAAGACGATGCTGATCGCGGCGCAAGCGCGTGAAGTTCG TAAGGATGAGCGGATCGAGCGACTGGAGAAGCTTGTCGCCGCATTCAAGCAGGCTGCCTTCGGTCGCAAATCCGAGAAGG CTGATCCTGAGCAGTTCGATCTCGCGCTGGAAGACCTGGAAACGACCATCGCTGCCATCCATGCCGAAGACGAGGCCGAT ACATCCTCGGGCAAGCAGCGATCCAAATCCCGCGCCGTCAATCGCGGCTCTCTTCTCGCCCATCTTCCTCGTATCGAAGA GATAATTGAACCGGAAAGCCTGATCTGCGCTTGCGGCGGTTGCCTGCATCGCATCGGAGAGGACGTGTCTGAGCGGCTGG ATGTTATCCCGGCGCAGTTCCGCGTCATCGTCACTCGCCGACCCAAATATGCCTGCCGTGCCTGTACTGATGGCGTTGCC CAGGCTCCAGCGCCCGCACGACTGATCCAAGCCGGATTGCCGACAGAGGCAACCATCGCGCATGTGCTGGTGTCCAAATA CGCCGACCATCTGCCGCTTTATCGACAGGCCCAGATTATGAGCCGCCAAGGCATCGATCTCGACCGTTCCACTCTGGCCG ATTGGGTTGGTCGGGCGGCATTCGAGTTGCGCCCGGTCTTCGACGCTTTGATCGCCGATCTAAAGCGCTCGACAAAACTG TTCATGGACGAAACCCGTGCGCCGGTCCTCGATCCAGGCTCTCGCAAAACCAAGACCGGATACTTCTGGGCGCTGGCCCG CGACGACCGACCATGGAGCGGCGGGGCTCCACCCGGAGTGGCTTTCACCTACGCTCCCGGTCGTGGCGGCCAACATGCCG AACGGATATTGCGGGGGTTCACGGGCGTTCTCCAAGTGGACGGCTACGCCGGATATAATCGGCTGATCGCACCGGACCGT GTCGGCCCGGACATCCGGCTTGCCTATTGTTGGGCACATGCACGGCGCAAGCTGGTCGAGATCACTCGTACCGGCACAGC GCCGATTGCCGAGGAAGGCGTGGAGCGGATTGGTGAACTCTATCGGGTCGAGTCCGAGCTACGCGGGCTTCCCGCAGAAG CTCGCCTCGCCGGGCGACAGGAACGATCAGCGCCATTGATTGCGGACATGCGAACTTGGCTCACGCAGCATCGTGCCCGC GTCGCTGGCAAGTCGTCGCTTGGCGAGGCGCTCGCCTACATCGCCAAATATTGGGATGGCCTCTGCGTCTTCTTGACCGA CGGTCGGATCGAGATCGACAACAATAGTATCGAGAGAACTATCCGGCCGATAGCGCTCAATCGGAAGAACGCTCTCTTCG CCGGGCACGACATGGGAGCACGGAATTGGGCAACCATCGCCTCGCTCATCGAGACGTGCAAGCTCAATGCCGTTGATCCA CAAGCCTACCTCACCAGCACGCTCACCGCTATCGTAAACGGCCATAAGCAAAACCGGATCGATGAACTCCTGCCGTGGAA TCATCCGGTTTAG Protein sequence : MLDTADFPDDIDALKTMLIAAQAREVRKDERIERLEKLVAAFKQAAFGRKSEKADPEQFDLALEDLETTIAAIHAEDEAD TSSGKQRSKSRAVNRGSLLAHLPRIEEIIEPESLICACGGCLHRIGEDVSERLDVIPAQFRVIVTRRPKYACRACTDGVA QAPAPARLIQAGLPTEATIAHVLVSKYADHLPLYRQAQIMSRQGIDLDRSTLADWVGRAAFELRPVFDALIADLKRSTKL FMDETRAPVLDPGSRKTKTGYFWALARDDRPWSGGAPPGVAFTYAPGRGGQHAERILRGFTGVLQVDGYAGYNRLIAPDR VGPDIRLAYCWAHARRKLVEITRTGTAPIAEEGVERIGELYRVESELRGLPAEARLAGRQERSAPLIADMRTWLTQHRAR VAGKSSLGEALAYIAKYWDGLCVFLTDGRIEIDNNSIERTIRPIALNRKNALFAGHDMGARNWATIASLIETCKLNAVDP QAYLTSTLTAIVNGHKQNRIDELLPWNHPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 4e-72 | 44 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 3e-63 | 44 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 5e-86 | 42 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 1e-80 | 41 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 1e-75 | 41 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 2e-69 | 41 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 3e-85 | 41 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 3e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RHE_PD00124 | NP_659913.1 | insertion sequence transposase | VFG1700 | Protein | 2e-72 | 44 |
| RHE_PD00124 | NP_659913.1 | insertion sequence transposase | VFG1513 | Protein | 2e-63 | 44 |
