Gene Information

Name : oppD (XAC0860)
Accession : NP_641212.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1021286 - 1022728 bp
Length : 1443 bp
Strand : +
Note : -

DNA sequence :
GTGCTGGCGCATGCCGGCCGCGATCTGCGCGGCTACAGCGAGCGGCAATGGCAGGAGTTACGCGGCAAGGACATCGGCTT
CGTTCTGCAGGACGCACTGGTATCGCTGGACCCGTTGCGCCCGGTCGGCCGCGAGATCGAGGAAGCATTGGCCGCACACG
GCTGGGGCGATCGCGCACGCCGTCGCGAACGGGTGCTGGAGCTGCTGCAACAAGCCGGTGTGCCGGAACCGGCCTTGCGC
GCACGCCAACGCCCGGACCAGCTTTCCGGCGGATTGCGCCAACGCGCGTTGATCGCCTCGGCGCTGGCCAACGCACCCGG
CATTCTGATCGCCGACGAGCCGACCACCGCACTGGACGCCACCGTGCAGGTGCAGGTGCTGGCGGCCTTGCAGGCGATCA
AGCGACGCGGTGGGGCATTGCTGGTCATCAGCCATGATCTGGCGCTGGTGGCGCAACTGGCCGACGAGGTGGTGGTACTG
CGCCACGGCGAGGTGGTCGAGCAGGGGCCGATCGCGCAGGTGCTGCAGCGGCCGGCTCATGCCTATACGCGTGCGCTGCT
CGCGGCAATTCCCGGCGGCCGCGGGCCGCGCGTTGCGACTGCCCTGGCCAGTGCAGAGCCCGCCAACGCACCGACACCGC
CGTTGCTGGAGGTGCGCGGCTTGCGCAAGGCCTATCGCGGTCCGGATGGCGAGGCGCGTCTGGCTGTCGATGGGGTCGAT
CTGGTGTTGCAGGCCGGGCGCACGCTGGGGGTGGTCGGCGAATCCGGTTCCGGCAAAAGCAGCCTGGCACGGCTGATTCT
GGGGCTGACCGAGGCGGATGCAGGCGAGGTACGGCTGAACGGCCGGCCCTGGATCGGCAGCGCCGCCGCACGCGTGTCCG
AAGCGCAACGTCGGCCGTGGCGGCGTGCGATCAGTGCGGTCTACCAGGATCCGCTGAGTTCGTTCGACCCCCGCTGGACG
GTGGCCCGCATTCTCGGCGACGCGCTGGATGCGGTCGGCCTGCCGCGTGCTGCACAGCGCGCCCGGATCGCCGAGCTGCT
CGAACTGGTACGGCTCGGTACCGCGCTGGCCGACCGCTTCCCGCTGCAGCTCTCCGGTGGCCAGCGCCAGCGCGTGGCGA
TCGCGCGCGCCATCGCCACCGAGCCGCGCCTGATCGTGCTGGATGAAGCGGTGTCGGCACTCGACGTATCGGTCCAGGCG
CAGGTGCTCGACCTGCTGGCCGATCTGCAGGCACACCTGGGGCTGGCCTACCTCTTCATCTCGCACGACCTCGGCGTGAT
CCGTCAGGTCAGTCACGACATCCTGGTGATGCGGCACGGACAGGTCCAGGAGGCGGGACCGGCCGAGCAGGTGTTCGCAC
AGCCGCGTGCGGCCTATACGCGTGCGTTGCTGGCGGCGATGCCGCGTCTGCCAGCGCCAGTCGACGCATTGCGGCAGGCC
TGA

Protein sequence :
MLAHAGRDLRGYSERQWQELRGKDIGFVLQDALVSLDPLRPVGREIEEALAAHGWGDRARRRERVLELLQQAGVPEPALR
ARQRPDQLSGGLRQRALIASALANAPGILIADEPTTALDATVQVQVLAALQAIKRRGGALLVISHDLALVAQLADEVVVL
RHGEVVEQGPIAQVLQRPAHAYTRALLAAIPGGRGPRVATALASAEPANAPTPPLLEVRGLRKAYRGPDGEARLAVDGVD
LVLQAGRTLGVVGESGSGKSSLARLILGLTEADAGEVRLNGRPWIGSAAARVSEAQRRPWRRAISAVYQDPLSSFDPRWT
VARILGDALDAVGLPRAAQRARIAELLELVRLGTALADRFPLQLSGGQRQRVAIARAIATEPRLIVLDEAVSALDVSVQA
QVLDLLADLQAHLGLAYLFISHDLGVIRQVSHDILVMRHGQVQEAGPAEQVFAQPRAAYTRALLAAMPRLPAPVDALRQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-58 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-53 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-53 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-53 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-53 41