|
Name : oppD (XAC0860) Accession : NP_641212.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1021286 - 1022728 bp Length : 1443 bp Strand : + Note : - DNA sequence : GTGCTGGCGCATGCCGGCCGCGATCTGCGCGGCTACAGCGAGCGGCAATGGCAGGAGTTACGCGGCAAGGACATCGGCTT CGTTCTGCAGGACGCACTGGTATCGCTGGACCCGTTGCGCCCGGTCGGCCGCGAGATCGAGGAAGCATTGGCCGCACACG GCTGGGGCGATCGCGCACGCCGTCGCGAACGGGTGCTGGAGCTGCTGCAACAAGCCGGTGTGCCGGAACCGGCCTTGCGC GCACGCCAACGCCCGGACCAGCTTTCCGGCGGATTGCGCCAACGCGCGTTGATCGCCTCGGCGCTGGCCAACGCACCCGG CATTCTGATCGCCGACGAGCCGACCACCGCACTGGACGCCACCGTGCAGGTGCAGGTGCTGGCGGCCTTGCAGGCGATCA AGCGACGCGGTGGGGCATTGCTGGTCATCAGCCATGATCTGGCGCTGGTGGCGCAACTGGCCGACGAGGTGGTGGTACTG CGCCACGGCGAGGTGGTCGAGCAGGGGCCGATCGCGCAGGTGCTGCAGCGGCCGGCTCATGCCTATACGCGTGCGCTGCT CGCGGCAATTCCCGGCGGCCGCGGGCCGCGCGTTGCGACTGCCCTGGCCAGTGCAGAGCCCGCCAACGCACCGACACCGC CGTTGCTGGAGGTGCGCGGCTTGCGCAAGGCCTATCGCGGTCCGGATGGCGAGGCGCGTCTGGCTGTCGATGGGGTCGAT CTGGTGTTGCAGGCCGGGCGCACGCTGGGGGTGGTCGGCGAATCCGGTTCCGGCAAAAGCAGCCTGGCACGGCTGATTCT GGGGCTGACCGAGGCGGATGCAGGCGAGGTACGGCTGAACGGCCGGCCCTGGATCGGCAGCGCCGCCGCACGCGTGTCCG AAGCGCAACGTCGGCCGTGGCGGCGTGCGATCAGTGCGGTCTACCAGGATCCGCTGAGTTCGTTCGACCCCCGCTGGACG GTGGCCCGCATTCTCGGCGACGCGCTGGATGCGGTCGGCCTGCCGCGTGCTGCACAGCGCGCCCGGATCGCCGAGCTGCT CGAACTGGTACGGCTCGGTACCGCGCTGGCCGACCGCTTCCCGCTGCAGCTCTCCGGTGGCCAGCGCCAGCGCGTGGCGA TCGCGCGCGCCATCGCCACCGAGCCGCGCCTGATCGTGCTGGATGAAGCGGTGTCGGCACTCGACGTATCGGTCCAGGCG CAGGTGCTCGACCTGCTGGCCGATCTGCAGGCACACCTGGGGCTGGCCTACCTCTTCATCTCGCACGACCTCGGCGTGAT CCGTCAGGTCAGTCACGACATCCTGGTGATGCGGCACGGACAGGTCCAGGAGGCGGGACCGGCCGAGCAGGTGTTCGCAC AGCCGCGTGCGGCCTATACGCGTGCGTTGCTGGCGGCGATGCCGCGTCTGCCAGCGCCAGTCGACGCATTGCGGCAGGCC TGA Protein sequence : MLAHAGRDLRGYSERQWQELRGKDIGFVLQDALVSLDPLRPVGREIEEALAAHGWGDRARRRERVLELLQQAGVPEPALR ARQRPDQLSGGLRQRALIASALANAPGILIADEPTTALDATVQVQVLAALQAIKRRGGALLVISHDLALVAQLADEVVVL RHGEVVEQGPIAQVLQRPAHAYTRALLAAIPGGRGPRVATALASAEPANAPTPPLLEVRGLRKAYRGPDGEARLAVDGVD LVLQAGRTLGVVGESGSGKSSLARLILGLTEADAGEVRLNGRPWIGSAAARVSEAQRRPWRRAISAVYQDPLSSFDPRWT VARILGDALDAVGLPRAAQRARIAELLELVRLGTALADRFPLQLSGGQRQRVAIARAIATEPRLIVLDEAVSALDVSVQA QVLDLLADLQAHLGLAYLFISHDLGVIRQVSHDILVMRHGQVQEAGPAEQVFAQPRAAYTRALLAAMPRLPAPVDALRQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-58 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-53 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-53 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-53 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-53 | 41 |
