Gene Information

Name : ybaR (XAC0613)
Accession : NP_640966.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Resistance
Product : sulfate permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 726142 - 727629 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGTCCTTGTTGCGTGCCGAACTGGCGCAATGGCGCGCTTCCCCCGCGCGCGAACTCATGGCCGGTGCGGTCGCCACATT
TGCGCTGATTCCCGAAGTGATCGCGTTTGCATTCGTCGCCGGGGTGGATCCGCAGGTAGGCCTGTTCGCATCCTTCGTGA
TCGGCATCGTGATTGCGTTTTGCGGGGGGCGGCCGGCAATGATTTCGGCTGCTGCCGGCTCGGTGGCGCTGGTGGCTGCA
CCGCTGGTTGCCGCGCACGGGTTGCCATATCTGCTGGCCGCCGGCTGGCTGGCTGGCGTGGTCCAGATCCTGTTCGGGGT
GTTGCGGCTGGGCGTGCTGATGCGCTTTGTCAGCAGTTCGGTACGCACCGGTTTCGTCAACGCGCTGGCCGTGCTCATCT
TCGCAGCGCAATTGCCGCATCTGCTCGGCGCCAACCCGACCACCTGGGTCATGCTGGGCGCAGGCCTTGCCATCATCTAC
GGCCTGCCGCGTCTGCGCCTGCCGGGGCTGTCGGCGATTCCCTCGCCCCTGCTGTGCATCCTGCTGCTCAGCGTCGCCGG
CACTGCGCTGCATCTGCCGCTCAAGACGGTGGCCGATCTGGGCAAGCTGCCCAATGCGCTACCGTTCCTGCAATGGCCGG
CGGTGCCGTTGACGCTGGAGACGCTGCGCATCATCGCCCTGCCAGCGCTGGCCATTGCCATGGTGGGCCTGCTCGAGTCG
ATGATGACCGCGCGCGTGGTCGATGAACTCACCGACACGCCCAGCAACAAGAACCGCGAATGCACCGGGCTGGGCATCGC
CAACGCAGCCGCCAGCCTGTTCGGCGGCATTGCCGGCTGCGGCATGATCGGGCAGACCGTGGGCAACGTGAAATACGGCG
GCCGTGGCCGGCTGTCCACGTTGTTTGCCGGCGTGTTCCTGCTGATCCTGATGGTGCTGCTCAAGCCGTGGGTGTCGCAG
GTGCCGGTGGTGGCGCTGGTGGCGATCATGGTGATGGTGTCGGCGGAGACCTTCGACTGGCGCTCGCTGCGCACCGTGGT
GACCCACCCACGCACCTCCAGCGTGGTGATGCTGGCCACCGTGGCGGTCACGTTGTTCACCCACAATCTGGCAGCGGGTG
TGGCGGTCGGCGTGCTCCTGAGCGGGGTGTTCTTCACCTTCAAGGTGGCCGGGCTGCTGCAGATCGCGCATCACGATGGC
GCGGATGGCGTGCGCACCTACAGCGTGCGCGGGCAGGTGTTCTTCGCCTCGGCCGATGTGTTCATCGACGCCTTCGACGC
ACGCGAGGTGCCCGGCCGCGCAGTGGTGATCGATGTCGGCCGCGCGCATTTCTGGGACATCACCGCGGTGGCGGCACTGG
ACAAGGTGGTGCAGCGTTTGCGCCATCACGGTCTGGATGTGCAGGTGAAAGGCTTGAATGCCGGCAGCCGACGCCTGATG
CAGCGGCATGCCTTGGGCGAAGACGCGCTGGAATCGGCACTGCCTTAG

Protein sequence :
MSLLRAELAQWRASPARELMAGAVATFALIPEVIAFAFVAGVDPQVGLFASFVIGIVIAFCGGRPAMISAAAGSVALVAA
PLVAAHGLPYLLAAGWLAGVVQILFGVLRLGVLMRFVSSSVRTGFVNALAVLIFAAQLPHLLGANPTTWVMLGAGLAIIY
GLPRLRLPGLSAIPSPLLCILLLSVAGTALHLPLKTVADLGKLPNALPFLQWPAVPLTLETLRIIALPALAIAMVGLLES
MMTARVVDELTDTPSNKNRECTGLGIANAAASLFGGIAGCGMIGQTVGNVKYGGRGRLSTLFAGVFLLILMVLLKPWVSQ
VPVVALVAIMVMVSAETFDWRSLRTVVTHPRTSSVVMLATVAVTLFTHNLAAGVAVGVLLSGVFFTFKVAGLLQIAHHDG
ADGVRTYSVRGQVFFASADVFIDAFDAREVPGRAVVIDVGRAHFWDITAVAALDKVVQRLRHHGLDVQVKGLNAGSRRLM
QRHALGEDALESALP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 3e-89 53
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 3e-89 53
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 4e-90 52
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 5e-90 52
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 4e-90 52
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 5e-90 52
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 5e-90 52
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 5e-90 52
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 5e-90 52
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 5e-90 52
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 5e-90 52
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 5e-90 52
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 5e-90 52
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 4e-90 52
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 5e-90 52
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 4e-89 52
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 3e-89 52
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 3e-89 52
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 4e-89 52