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Name : tetA (XAC4295) Accession : NP_644589.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Resistance Product : tetracycline-efflux transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 5075447 - 5076712 bp Length : 1266 bp Strand : - Note : - DNA sequence : ATGTCCCTCTCTCCCGATTCCGCTCCCGTCCCGGGGCGCCGCCGCGCCGCGCTGATCTTCATCTTCATCACCGTCCTGAT CGACGTGCTGTCCTTCGGGGTCATCATTCCGGTACTCCCGGATCTGGTGCGCCACTTCACCGGTGGCGACTACGTCGTGG CCGCCGGCTGGATCGGCTGGTTCGGCTTCCTGTTCGCTGCCATCCAGTTCGTCTGCTCGCCGTTGCAGGGCGCGCTCTCC GACCGCTTCGGTCGCCGCCCGGTGATCCTGCTCTCGTGCCTTGGCCTGGGCCTGGACTTCATCCTGATGGCCATTGCCCA CAGCCTGCCGATGCTGCTGCTGGCGCGGGTCATCTCCGGCGTGTGCTCGGCCAGCTTCTCCACCGCCAATGCCTACATCG CCGATGTCACCCCACCGGACAAACGCGCCGGCGCATTCGGCATGCTTGGTGCCGCCTTCGGCATCGGCTTTGTCGCCGGC CCGTTGATCGGCGGTTGGCTGGGCAGCATCGGGTTGCGCTGGCCGTTCTGGTTTGCCGCCGGGCTTGCCCTGTTGAACGT GCTGTATGGCTGGTTCGTGCTGCCCGAATCGCTGCCCGCCCAACGCCGCACCGCGCGGCTGGACTGGTCGCACGCCAATC CGCTGGGCGCGCTCAAACTGCTGCGCCGCTACCCGCAGGTGTTCGGCCTGGCGTCGGTGGTGTTCCTGGCCAACCTGGCG CATTACGTCTATCCCAGCATTTTCGTGCTGTTCGCCGGTTACCAATACCATTGGGGCCCGCGCGAAGTGAGCTGGGTACT GGCCGGGGTCGGTATCTGCAGCATCATCGTCAATGCGCTGCTGGTCGGCCGCCTGGTGCGCCGGCTCGGCGAACGCCGCG CGTTGCTGCTGGGGCTGGGCTGCGGGGTGATCGGCTTCATCATCTATGGGCTGGCCGACAGCGGCACTGCCTTCCTGATC GGTGTGCCGATCAGTGCGTTGTGGGCCATTGCCGCACCGTCCGCGCAGGCCCTGATCACCCGTGAGGTCGGCGCCGACGC GCAAGGTCGCGTGCAGGGCGCGCTCACCGGTCTGGTCAGCCTGGCCGGCATCGTCGGTCCACTGTTGTTCGCCAATGTCT TCGCCTGGTTCATCGGCAGCGGTGCGCCGCTGCATCTGCCGGGCGCGCCGTGGTTGCTGGCTGCTGTCCTGCTGGCCGCA GGCTGGGGCATGGCCTGGAAACGGGCCGCGCGCGGCGCCGGCACCACACCCGCGGCGCAGACGTGA Protein sequence : MSLSPDSAPVPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALS DRFGRRPVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIADVTPPDKRAGAFGMLGAAFGIGFVAG PLIGGWLGSIGLRWPFWFAAGLALLNVLYGWFVLPESLPAQRRTARLDWSHANPLGALKLLRRYPQVFGLASVVFLANLA HYVYPSIFVLFAGYQYHWGPREVSWVLAGVGICSIIVNALLVGRLVRRLGERRALLLGLGCGVIGFIIYGLADSGTAFLI GVPISALWAIAAPSAQALITREVGADAQGRVQGALTGLVSLAGIVGPLLFANVFAWFIGSGAPLHLPGAPWLLAAVLLAA GWGMAWKRAARGAGTTPAAQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-33 | 41 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-34 | 41 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-34 | 41 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 9e-34 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 1e-33 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 9e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetA | NP_644589.1 | tetracycline-efflux transporter | NC_011586.7045189.p0 | Protein | 1e-30 | 41 |
| tetA | NP_644589.1 | tetracycline-efflux transporter | NC_010410.6002597.p0 | Protein | 5e-34 | 41 |
| tetA | NP_644589.1 | tetracycline-efflux transporter | CP001485.1.gene2821. | Protein | 5e-34 | 41 |
| tetA | NP_644589.1 | tetracycline-efflux transporter | AF534183.gene.p01 | Protein | 5e-34 | 41 |
