|
Name : gspE (XAC4212) Accession : NP_644511.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Virulence Product : general secretory pathway-like protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4962683 - 4964434 bp Length : 1752 bp Strand : + Note : - DNA sequence : ATGTTCGACCCGGTGGCCGCGGCCCTGCTGGCCGACGGCATGGTGGTACCGCACGAACACGAGCGCGTGCAGTTCTCCGC CAGCGGCGCGCGCACCGCCAGCGATGTGCATCCGCTGGTGCTGCTGGCCAATCTGAAGTTGCACGCCGCGCAGCCGCCGG CCGGCGAGCTGGGCCTGGAACGGCTCACCGAATGGCTGGCCACCCGCACCGGGCTGCGCTATCTGCGCATTGATCCCACC CGCATCGATGTGGCCGCGGTCACCGGCGTGGTCTCGCATGCGTATGCGCGCAGGCACCGCATCCTGCCGCTGGCGCTGGA TGCCGAGCGCGTGCTGATCGCCACCAGCGAGCCGTTGGCGCTGGACTGGCTGGCCGACGTGCAACACCTGAGCCGGCGCC GCATCGAGCTGGCGCTGATCAACCCGCTGGACCTGCATCGCTACACGATGGAGTTCTTCGGCGTCACCCAGTCGGTGCGC GGCGCGCGCAGCGATGCGCGCAGCACCGAACCCAACGCCGGCCTGCCCAGTTTCGAGCAGCTGGTGGAACTGGGCCGCGC CGGCGACGTCAATGCCGACGACCACCACATCGTGCATATCGTCGACTGGCTGCTGCAGTACGCCTACGAACAGCGGGCGA GCGACATCCATCTGGAGCCGCGTCGCGAGGCCGGGCGCATGCGCTTCCGCATCGATGGCGTGCTGCACAAGGTGCTGGAA GTGCCGCCCTCGGTGATGACCGCCGTGGTCAGCCGCATCAAGGTGCTCGGGCGCATGGATCTGGCCGAACGCCGCCGCCC GCAGGATGGCCGCATCAAGACCCGCTCGCCGGGTGGGCGCGAGGTGGAAATGCGGCTGTCCACGATGCCCACCGCCTTCG GCGAGAAGTGCGTGATGCGCATCTTCGACCCGGATTCGGCGTTCAAGAGCATCGAGCAGCTGGGTTTCAGCCCCGAAGAA GCCACCGGCTGGAGCGCGCTGGTCGAGCGCCCGCACGGCATCGTGCTGGTTACCGGCCCCACCGGCTCGGGCAAGACCAC CACGCTGTATTCCACGCTCAAACGCCTGGCCACGCCGGATGTGAACGTGTGCAGCGTGGAAGACCCGATCGAGATGATCG CGCCGGAATTCAACCAGATGCAGGTGCAGCAGAACATCGACCTGGATTTCGCCAGCGGCGTGCGCACGCTGCTGCGCCAG GACCCGGACATCATCATGATCGGCGAGATCCGCGACCTGGAAACCGCGCAGATGGCGGTGCAGGCCTCGCTCACCGGGCA TCTGGTGCTGTCCACGCTGCACACCAACGATGCCGCCTCGGCAATCACCCGCCTGCTCGACCTGGGCGTGCCGCATTACC TGGTGGCCTCCACCCTCAACGGCGTGCTGGCGCAGCGGCTGGTGCGCACGCTGTGCGTGCATTGCAAGCGCCCGCACACG CTCAACGACGCCGACTGGGCGGCCATCCGCGAGCCCGGCGAGGCGCTGCCGGAACCGCTCAACGTGCACGCCCCGGTCGG TTGCCTGGAATGCCGCCGCACCGGTTACCTGGGCCGGGTGGGCCTGTACGAACTGCTGCCGGTCACCCCGCGCCTGCGTA CCCTCATCCGCCCGGATACGGAACTTGCCAGCTTCAGCCAGGCTGCCCGCGGCGAAGGCCTGCGCACGCTGCGCCGCACC GGCCTGGAGAAGGTCGCCGCCGGGCTGACCACCATCGAAGAAGTGCTGTCGGTGCTGCCGCCGCGGGAGTAG Protein sequence : MFDPVAAALLADGMVVPHEHERVQFSASGARTASDVHPLVLLANLKLHAAQPPAGELGLERLTEWLATRTGLRYLRIDPT RIDVAAVTGVVSHAYARRHRILPLALDAERVLIATSEPLALDWLADVQHLSRRRIELALINPLDLHRYTMEFFGVTQSVR GARSDARSTEPNAGLPSFEQLVELGRAGDVNADDHHIVHIVDWLLQYAYEQRASDIHLEPRREAGRMRFRIDGVLHKVLE VPPSVMTAVVSRIKVLGRMDLAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIFDPDSAFKSIEQLGFSPEE ATGWSALVERPHGIVLVTGPTGSGKTTTLYSTLKRLATPDVNVCSVEDPIEMIAPEFNQMQVQQNIDLDFASGVRTLLRQ DPDIIMIGEIRDLETAQMAVQASLTGHLVLSTLHTNDAASAITRLLDLGVPHYLVASTLNGVLAQRLVRTLCVHCKRPHT LNDADWAAIREPGEALPEPLNVHAPVGCLECRRTGYLGRVGLYELLPVTPRLRTLIRPDTELASFSQAARGEGLRTLRRT GLEKVAAGLTTIEEVLSVLPPRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-71 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-72 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_644511.1 | general secretory pathway-like protein | VFG2048 | Protein | 1e-71 | 45 |
