Gene Information

Name : XAC4142 (XAC4142)
Accession : NP_644441.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 4869371 - 4871254 bp
Length : 1884 bp
Strand : -
Note : -

DNA sequence :
ATGGACCCGCGCCTACTGCCGTACTACACCCGCGAGTTGCAGCACGTGCGCGACATGGGCGCGGAGTTTGCGCGCGAGTA
TCCCAAGATCGCCGGCCGGCTTGGCCTGGACGCGTTCGAATGCGCCGACCCCTATGTCGAGCGGCTGCTGGAAGGCTTCG
CGTTTCTGGCCGCGCGCGTGCAACTCAAGCTGGACGCGCAGTACCCGGTGTTCACCCAGCACCTGCTGGAGATGGTCTAC
CCGCATTATCTGGCGCCGCTGCCGTCGATGGCGGTGGTGCAGTTGCAGCCGGATCTGAAAGACAGCGGGCTGGCAGCAGG
CGTCGTCGTGTCGCGGCAAAGCGCGCTGCGCAGCCTGGTCGGCCCCGGCGAGCGCACCGCCTGCGAATTCCGCACCGCGC
ATCCGGTGACCTTGTGGCCGTTGCAACTGGCCGAGGCCAAGTATCTGGAATCGCCAGCCGCCTTGGCCGCTGCCGGCATC
GCTTTGCCGCCCGGGCGCGTGGTGCGTGCCGGCGTGCGGCTGCGCTTCGAGCTGGTGGGTGGTGCGCAGACGCACGCGCT
GGCGCTGGATCGGCTGCCGCTGTTTCTGGCCGGCGCCGACGGCCTGCCCAAGCGGTTGTACGAACAACTGCATGCCGATA
CCACCGCCGTGGTGGTGCGTGGCAGCGATGCCCGCGGTGGCACGCTGGAGGTGACGCTGGACGCCGATGCCGTGCAGATG
CGCGGCTTTGCCGACGACGATGCATTGATTCCGTACGACGGCCGTTCGTTCAGTGGCTATCGCCTGCTGCAGGAGTATTT
CGCCTGCCCGGAGCGCTTTTTGTTCGCAGAGCTCGCCGGGCTGCGCGCGCCATTGCGGCGGTTGCACGGCAGCAGCTTCG
AGGTGGTGGTGTTGCTGCAACGCAGCCTGCCCAGCCTGGCTGCGGCAGTAGACGCCGAGCACTTCAAATTGTTCTGCACC
CCGGCGATCAATCTGTTCCCGCGCCGCGCCGATCGCATCCATCTGCAGGCCGGGTTGCACGAGTACCACGTGCTGGCCGA
CCGCACCCGGCCGATGGATTTCGAGATCCATCACCTGGGCGAGGTCGAAGGCTTCGGCGATCGTCAGGAGCCCGAGCAAT
GCTTCACCGCGTTCTATGGTGGCGACGCACGCACCTGGCATGCACGGCATGGCGCGTTCTACAGCATGCGCCGTGAACCG
CGCATGCTATCGGCACGTCAGCGCCGCGATGGCGCGCGGTCGAGCTATGTGGGCAGCGAAGTCTTCGTCAGCCTGGTCGA
TGCCGACGATCAGGCCCACAGCACGCGCCTGCGTCAGCTTGGGCTGCAACTGTGGTGCAGCAACCGCGATCTGCCGCTGC
ATATGCCGGTAGGCAAGGGCGCAAGCGACTTCACCATGGACAGCGGCGTGCCGGTACGGAGCGTGCGCTGCGTGGCCGGG
CCGACCAAGCCGCGCCCGGCATTGTCGGATGGGCAGACTGCGTGGCGCCTGCTCAGTCAATTGCAGCTCAATTATCTGTC
GCTGTTCGAAGATGGCCCCGACGGCGCCGCTGCGCTACGCGAGATCCTCGCCCTGTATTGCGACCCGTTCGACGCGTCCG
CGCAGCGGCAGATCGAAGGCGTCAAGCAGGTGAGCGGCACACCGATCGTGCGGCGCATTCCGGTGCCGGGTCCGATCACC
TTCGGCCGCGGCCTGGAGATCACGCTGACCTGCGAGGACGCCGCCTTCGAAGGCACTGGCGCCTTCCTGCTGGCTTCGGT
GCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTTACCGAAACCGTGCTGCGTACCACCGAACGCAACGAGG
TGGCCCGGTGGCCAGCCCAGCCCGGCACGCGCCCGCGCCTGTGA

Protein sequence :
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFTQHLLEMVY
PHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLVGPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGI
ALPPGRVVRAGVRLRFELVGGAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQRSLPSLAAAVDAEHFKLFCT
PAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREP
RMLSARQRRDGARSSYVGSEVFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEGVKQVSGTPIVRRIPVPGPIT
FGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWPAQPGTRPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 1e-107 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC4142 NP_644441.1 hypothetical protein VFG2074 Protein 1e-160 57