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Name : hrpF (XAC0394) Accession : NP_640749.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Virulence Product : HrpF protein Function : - COG functional category : - COG ID : - EC number : - Position : 465213 - 467687 bp Length : 2475 bp Strand : - Note : - DNA sequence : ATGGGCGCACCCGTGCGGCCGTATAAGAGAAAGCTTATACGCAGGTGCTTCTGCCAATTCTGCCATTGCGAGGCCGCCCA TATGTCGCTCAATACACTTTCTACCGGGAGCAACCCCAGCCAATTGCTGGGCACTCCTCTAAACGAGTCCGATTCGTCGG AGCTGTTGGGGTCGGATTCGTCCAAGGATGACTCCGATCTGCCGTCGACGATGGACGACATCTTTCTGCTGATCTACCAG CTGCTGGCAGCCCTCCAAACCAACGCGCCAACGAGTACATCAGGCAATGGGTCGGCCGATGCACCAACAAGCGCGCCAAG CGGCGATGCCAGCACCCCGTCTTCTGCATCGGACGATCAAGCCAACCAGCCGATCGAGAAGCGCACCTCGTGGCCATCGC TGGGCTACGACTTCGATCCCAAGGACATCAAGGGTAAGGACGCGCCACCAGCATTGGAGGGCTCAACGGTCACCTGGAAC GGTGGCACGCTCACACCATCGGAGCTGCAGATCGTTTCGACCTTGAATGCCCACAAGGATCAGATGCCGCTCGAATACAA GAATCTCGATGACAAGATCAACGACCCTTCCACGCCCGCCGACCTGAAGGCCGCATTGCAGGGACTGAAGCAGGACCCGC GCTTGTTCTTTGCGATCGGTTCGCAGGGAGACGGCAAGTGCGGCGGCAAGATCAAGGCGCAGGATCTCTGGGATTTCTCC GATTCGCATCCGCAGGTCAAGGCGATGGGCGGGAAGAACGACCAGTTCAACCCCAAGGACATCAAGGGATCGACGCCACC TCCCGCCGTCGATGGCTCATCGGTCACCTGGGATGGTGGAACGCTCACCCAGAATGAGCTGGAAATCGTCAGTACGCTCA ATCGCCATAAGGATCAGTGCCCACTCAAGTGGTCCGATCTGGATGCAAAGATCAACGACCCGTCGACACCACCGGATCTG AAGAAGGCATTGACGGACTTGCAGTCGGACCCGCGGCTGTTCTTCGCGATCGGCTCGCAAGGTGATGGCAAGTGCGGCGG CAAGATCAAAGACGGCGATCTCGGCAAGTTCGTCTCCCACCATGCGCAGGTCGCCGAGTACGCCGACAAGCAAGCAAAGA ACTACACACAGAACTACGTGGCCTCGGACAGCCCGGACAAGACCAAGGCGTCGGTAATGAACGAGAGCGATGCCATGCGT GAGCTGTACCGCTATTCGGACTATCTGCCGGACGATCTGAATCAGGATACCTTCAAGTCTCTGGTGGATGGCGAAAGCAG CACCAAGAAATGTCCGCCGCAGGTCATCGCTGCCGCACAGTATTTTCGTGATCATCCCGACCAGTGGAAAGCGCTGGCAG GAGACTCCGGCTCGATGAGCAAACCGGACTTCCTGCAGAAAGCCAGCTCCGAGATTCACCTGACGGCGGACGAGCAGAAG ACGCTGGACACCATCAACAGTCATCAAGACGCTTTTTACGGCGATGGCAAGGAAGTGACCCGCGACAAGCTCGACTCCAT TTCCAAGGACGACAAGGCCGACCCCGCGGTGAAAGAGGCCGCGACGCAGTTGTTGAACGATCCGTTGCTGTTCGGGTTGT TGAACAACTCGATCACCGGCTACAAGAAGCCACATCGCTTCTTCGGGGGTGGTCATGTCGTCGACTCGGGCAAGATCAGC CAGGACGATTTCCGGCGGTTCTACGACAACATGAGCGCAGCCAACAAGACCGTGGACAAGCCGGTCACGCACGATGCCAG CTCGGCCGAGCAGCAAAAGGCCGTCTCGGACATGCTGATGGGCAAGGACGATCCGCCCGCGATCAAGAAGCCCAAAAAAG ACGTCGGCGTGTTCCAGGAGGGCTTGCACGAGTTCCTCAAGTGGGACAGCAAGATCCTGGACTGGATGTCCGTTGGCCTC AGCGCATTGAATGGGATTCCCATCATCGGCGAAATTACCGATGCGGCGTCGATTGCATTGGAAAGCGAGGCGCAGGCGGC GCAGGTGGTCGACACCGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAATATGGCCGGAGCAG TGGTTGGAGCAGTCGGCGGACCCACGGCCAGAATCGGAGCCAAGGCGGTCGCCAAGGGAGTCGCCGAAGCCGCGGCCAAG GGAACTGCCAAGGGCGTGGCCAAAGGTGCGGGTAGAACGGCGGCCGAACGGCCGAGCGCCGCGGAGTTCGCAAAAGGCTA TGTCGGCGGCACTGCCATCAGTAAATCGGTTGAAATTCTCAAGACGCCCGTCTTGGCGGGCTTGCATTACGAAGAATATC GACTGGACAAGCAGAAAGAAGGAGAGATCCACCAGAAGATGGAAAACGCCGGCGGCATCCCGATGGGTAAGCAGATTGTT CCCACGAACGTTGCCAACAATTTCGAGGGAGACCTGCGACAGAACCTGAGGAATATCAGAGTGCGTCGTAGATAA Protein sequence : MGAPVRPYKRKLIRRCFCQFCHCEAAHMSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQ LLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWN GGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFS DSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDL KKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMR ELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQK TLDTINSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKIS QDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGL SALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAK GTAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIV PTNVANNFEGDLRQNLRNIRVRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 100 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 84 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 0.0 | 81 |
| hrpF | YP_198705.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 80 |
| hrpF | NP_636591.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
| XC_3025 | YP_244093.1 | HrpF protein | Virulence | Hrp PAI | Protein | 0.0 | 69 |
