Gene Information

Name : alr (XAC3687)
Accession : NP_643994.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 4364048 - 4365148 bp
Length : 1101 bp
Strand : -
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
GTGCGTCCTGCGCAAGCGTCGATCGATCTGGAGGCATTGCGCCACAACTACCGCCTGGCCAAGCGCCTGGGCGGCAGCAA
GGCGCTGGCGGTGGTCAAGGCCGACGCGTACGGACACGGTGCAGTGCGCTGCGCGCAGGCGCTGGAGCCGGAAGCCGATG
GCTTTGCAGTGGCCTGCATCGAAGAGGCGCTGGAACTGCGCCAGGCCGGCATCCGTGCGCCGATCCTGTTGCTGGAAGGA
TTCTTCGAACACGACGAGCTGCGCCTGATCGCCGAGCACGACCTGTGGACGGTGGCTGCCACGCCGCAGCAGGTGCGCGC
GCTGGCCGAGTTCCAGAGCCCGCGGCCGTTGCGGGTATGGTTGAAGCTGGACAGCGGCATGCATCGGCTGGGTCTGTCGC
CGGAAGATTTCCGCGCCGCCTGGTTGCGCCTGCGGGGGCTGCCGCAGATCGCCTCGCTGGTGCTGATGACCCATCTGGCG
CGTGCCGACGAATTGGACTGCAGCCGCACCGACGAGCAGGCGGTGGCCTTTGCGCTCACCGCAGGCGGCATGCGCGCGGA
AACCAGCCTGCGCAATTCGCCCGGCCTGCTCGGCTGGCCGGCGCTGCGCAACGACTGGTCGCGCCCGGGGCTGATGTTGT
ACGGCGCCAACCCGTTCCCGCAGGACACCGAAAACACCGCGCAGCTGCGCCCGGTGATGACGCTGCGCTCGCGCATCATT
TCGGTTCGCGAGCTGCCGGCCGGCGAACCGGTGGGCTACGGCGCACGCTTTGTTGCCGAGCGGCCGACGCGTGTCGGCGT
CGTGGCGATGGGCTATGCCGACGGCTACCCGCAGTTCGCACCCAACGGCACCCCGGTGCTGGTGGACGGCCAGGTCTGTC
CGTTGGCCGGTCGCGTCTCGATGGACATGCTCACCGTGGACCTCACCGACCACCCGCAGGCCGACATCGGCACGCCGGTG
CAGCTGTGGGGTGATGCACCGCAGGTCGGCGCACTGGCCGCGCAATGCAACGTCAGCGCGTACCAACTGCTGTGCGGGCT
CAAGCGGGTGCCGCGGGTGTATATGGGCGAGGCAGCAGCGAAGGAGGGAGTCACGCGTTGA

Protein sequence :
MRPAQASIDLEALRHNYRLAKRLGGSKALAVVKADAYGHGAVRCAQALEPEADGFAVACIEEALELRQAGIRAPILLLEG
FFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRVWLKLDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLA
RADELDCSRTDEQAVAFALTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSRII
SVRELPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPNGTPVLVDGQVCPLAGRVSMDMLTVDLTDHPQADIGTPV
QLWGDAPQVGALAAQCNVSAYQLLCGLKRVPRVYMGEAAAKEGVTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 2e-61 46