Gene Information

Name : ugd (XAC3581)
Accession : NP_643888.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 4247266 - 4248432 bp
Length : 1167 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATCGCTGTCGCGGGTACCGGCTATGTCGGTCTGTCCAATGGCGTGTTGCTCGCCAGGCACCATGAAGTGGTGGC
GCTGGACATCGTCGAGTCCAAGGTCAAGTTGCTCAACGAAGGCCGCTCGCCGATCGTCGACAAGGAACTCGAGGCCGCGC
TGGCCCAGGGTGGCCTGAACTTCAAGGCCACCCTGGACGCCAACGAGGCGTTTGCCGGCGCGGAGTTCGTGATCATCGCC
ACACCCACTGACTACGATCCGGACACCAACTATTTCAACACCGGGTCGATCGAGGTCGTGATCGCCAAGGTGCTGGAGAT
CAATCCGCAGGCGACCATGGTGATCAAATCCACCATTCCGGTCGGCTACGTCGCCAAGGTGCGCGCGCAGTTCGGGACCG
ACAACATCATCTTCTCGCCGGAATTCCTGCGCGAAGGCCGGGCGTTGTACGACAACCTGTACCCGTCCCGGATCATCGTC
GGCGAACGTTCGGCGCGCGCGGAGACCTTCGCGCGGCTGTTGCAGCAAGGCGCGCTCAAGCCCGACGTGCCGGTGTTGTT
CACCGAGCCGACCGAGGCCGAGGCGATCAAGCTGTTCGCCAATACCTACCTGGCGATGCGCGTGTCCTACTTCAACGAAC
TGGACACCTACGCGCTCACCCATGGGTTGGACAGCCGCCAGATCATCGAGGGCATTTGCCTGGATCCGCGTATCGGCAGC
CACTACAACAACCCGTCCTTCGGCTATGGCGGTTACTGCCTGCCTAAGGACACCAAGCAGCTGTTGGCCAACTACCAGAG
CGTGCCGCAGACCATCATCCGGGCGATCGTCGATTCCAACACGACCCGCAAGGACTTCATCGCCGCCGACGTGCTGCGAC
GCAATCCCAAGGTGGTCGGCATCTATCGGCTGATCATGAAGGCCGGGTCCGACAATTTCCGTTCGTCCAGCATCCAGGGG
GTGATGAAGCGCCTCAAGGCCAAGGGCGTGGACGTCATCGTGTACGAGCCGACCTTGAAAGATCCTGAGTTCTTCCGCTC
GCGCGTGGTCAACGACCTGCAGGCCTTCAAGCGCGAGGCCGACGTCATCATCAGCAACCGCATGGCCGAGGCGCTGCAGG
ACGTGCAGGACAAGGTGTATACGCGCGACCTGTTCGGCGACAACTGA

Protein sequence : 
MKIAVAGTGYVGLSNGVLLARHHEVVALDIVESKVKLLNEGRSPIVDKELEAALAQGGLNFKATLDANEAFAGAEFVIIA
TPTDYDPDTNYFNTGSIEVVIAKVLEINPQATMVIKSTIPVGYVAKVRAQFGTDNIIFSPEFLREGRALYDNLYPSRIIV
GERSARAETFARLLQQGALKPDVPVLFTEPTEAEAIKLFANTYLAMRVSYFNELDTYALTHGLDSRQIIEGICLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANYQSVPQTIIRAIVDSNTTRKDFIAADVLRRNPKVVGIYRLIMKAGSDNFRSSSIQG
VMKRLKAKGVDVIVYEPTLKDPEFFRSRVVNDLQAFKREADVIISNRMAEALQDVQDKVYTRDLFGDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-94 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd NP_643888.1 UDP-glucose dehydrogenase VFG0963 Protein 6e-102 58