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Name : xerD (XAC3551) Accession : NP_643858.2 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4210642 - 4211613 bp Length : 972 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGTCTGCCAGCAGCCCCGCCGAACGCCGCCAACTAGCCCGCCACCTGCCGCCGGTGCAGCCGGCTGATGCCAGCGTCAT CGAACGGTTTCTCGACCGGTTCTGGGCCGAGCAGGGCGTGGCGCGGCAGACCCTGGAGAGTTATCGGCGCGATCTGGAAG GGCTGGCGCGTTGGCGCGATGGCGCTGGTGGCGGCTTGCTGGGCATCGACCGTGCCGCCCTGTTCGACTATCTGCGCTGG CGCACCCGGGCGAATTATTCTCCGCGCAGCACGGCGCGGCTGTTGTCGACCTTGCGTGCGTTCTACGGACTGTGCCTGCG CGATGGCGCGCGCAGCGACGACCCCACCGCCTTGATCGACCCGCCGCACCTGCCACGCTCGCTGCCAAAGGCCTTGACCG AAAGTCAGATCGAGGCCCTGCTGGCTGCGCCGGACCTTGACACACCTGCGGGCCTGCGCGATCGCGCCATGCTGGAACTG ATGTACGCCGCGGGCCTGCGTGTGAGCGAGCTGGTCAACCTGCCGGCAGTGGGGGTGAACCTGCGCCAGGGCGTGTTGCG GGTGACCGGCAAGGGCAGCAAGGACCGGCTGGTGCCGCTGGGCGAGGAATCCCAGCATTGGTTGGAGCGTTACCTGCGCG AGGCGCGCCCGCTGCTGGCCGCGAACAAGCCGGTGGCAGCGGTGGACGGGCAGGTGCCGTTGTTCATCGATGTCTCCCGC CAACCGCTCAGTCGTCAACAATTCTGGGCGCTGGTCAAACGCTACGCAGCGGTGGCCGGCATCGACCCGGCCACGGTCAG CCCGCACGGGCTGCGCCACAGCTTTGCCACCCATCTGCTCAACCACGGCGCCGATCTGCGCGCGTTGCAGATGCTGCTGG GCCACAGCTCGTTGTCGACCACCCAGATCTATACGCTGGTGGCGCGCCAGCATCTGCAGAAACTGCACGCCAGTCATCAT CCGCGTGGTTAG Protein sequence : MSASSPAERRQLARHLPPVQPADASVIERFLDRFWAEQGVARQTLESYRRDLEGLARWRDGAGGGLLGIDRAALFDYLRW RTRANYSPRSTARLLSTLRAFYGLCLRDGARSDDPTALIDPPHLPRSLPKALTESQIEALLAAPDLDTPAGLRDRAMLEL MYAAGLRVSELVNLPAVGVNLRQGVLRVTGKGSKDRLVPLGEESQHWLERYLREARPLLAANKPVAAVDGQVPLFIDVSR QPLSRQQFWALVKRYAAVAGIDPATVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQKLHASHH PRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-50 | 57 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-50 | 57 |
