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Name : xpsE (XAC3544) Accession : NP_643851.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4187865 - 4189460 bp Length : 1596 bp Strand : - Note : - DNA sequence : ATGGGGTTGCTCGCCTTGCTCGGCCGTTTGGGTCTGGTGTCCGAACGCGATCATGCAGAAACCTGCGCCGACGTCCTTGG CTTGCCGTTGGTGGACGCACGCCAGCTCGGCGATACGCCGCCGGAAATGCTGCCCGAAGTGCAGGGGTTGTCGCTGCGTT TTCTCAAACAATTTCATCTGTGTCCGGTCGGCGAGCGCGATGGCCGGCTGGAGCTGTGGATCGCCGATCCTTACGACGAT TACGCCATCGATGCAGTGCGTCTTGCCACCGGCTGCACGTTGCTGTTGCAGGTGGGCCTGCGTTCGGAAATCGATGACCT GATCGAGCGCTGGTACGGCCAGGGCCGCAGTGCGATGGGCACCATCGTCGAAACCGCCGATGGCGATGCCAACAGTAGCG ACGACATCGAAGCGCTGCGCGATCTGGCCTCCGAAGCGCCGGTGATCCGGCTGGTGAACCTGGTGATCCAGCACGCGGTG GAACTGCGCGCCTCCGACATCCATATCGAACCGTTCGAAAGCCGCCTCAAGGTGCGTTACCGCGTGGACGGCGTGCTGGT GGAAGGCGAAAGCCCGCCGGCCAAGCTCACTGCTGCGGTCATCAGCCGCATCAAGATCATGGCCAAGCTCAACATCGCCG AGCGCCGCCTGCCGCAAGACGGCCGCATCATGCTGCGCGTGCAGGGCAAGGAGCTGGATCTGCGCGTCAGCACCGTGCCC ACTGCGCATGGCGAAAGCGTGGTCATGCGCCTGCTCGATCGCGAGACGGTGGTGTTCGACTTCTACAAGCTCGGCTTCAC CGAAGACTTCTTGCCGCAGTTCCGCAAGGTGCTGGAGCAACCGCACGGCACCATGCTGGTGACCGGGCCCACCGGTTCGG GCAAGACCACCACGCTGTACACCGCGTTGAGCCAGCTCAACACCTCGGATGTGAAAATCATCACCGTCGAAGACCCGGTG GAATACCAGATCGAAGGCATCAACCAGATCCAGGCCAAGCCGCAGATCGGGCTGGATTTCGCCAACGCATTGCGCAGCAT CGTGCGTCAGGATCCGGACATCATCATGATCGGCGAAATGCGCGATCTGGAAACCGCACGCATCGCGATCCAGTCCGCGC TCACCGGCCACCTGGTGCTGTCCACGCTGCACACCAATAACGCGGCCGGCGGCATCACCCGTCTGCTCGACATGGGCGTG GAGGATTATCTGCTCACCTCCACCATCAACGGCATCCTGGCGCAGCGTCTGGTGCGCAAACTCGACCTGGCCAATGCCGA GCGCTATGCGGCTTCGCCGGAAGAAATCGCCAAGTTCGATCTGCGCCGCCTGCAACCGGAGGGCGACATCTTTCTGTATC GCCCGCGTCCCTCGGCCACCGCACCTACCGGGTATCTTGGACGCACCACCATCGTCGAATTCCTGGTGATGAACGACGAA CTGCGCCGTGCGGTGATGCGCCGTGCCGGCATGGGCGAAATCGAACAACTGGCCCGCCAGGCCGGCATGCGCACCATGTA CGAGGACGGGCTGTCCAAGGCCCTGCGTGGCGAAACCACCATCGAAGAAGTCCTGCGCGTCACGGAGGATGCGTGA Protein sequence : MGLLALLGRLGLVSERDHAETCADVLGLPLVDARQLGDTPPEMLPEVQGLSLRFLKQFHLCPVGERDGRLELWIADPYDD YAIDAVRLATGCTLLLQVGLRSEIDDLIERWYGQGRSAMGTIVETADGDANSSDDIEALRDLASEAPVIRLVNLVIQHAV ELRASDIHIEPFESRLKVRYRVDGVLVEGESPPAKLTAAVISRIKIMAKLNIAERRLPQDGRIMLRVQGKELDLRVSTVP TAHGESVVMRLLDRETVVFDFYKLGFTEDFLPQFRKVLEQPHGTMLVTGPTGSGKTTTLYTALSQLNTSDVKIITVEDPV EYQIEGINQIQAKPQIGLDFANALRSIVRQDPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTNNAAGGITRLLDMGV EDYLLTSTINGILAQRLVRKLDLANAERYAASPEEIAKFDLRRLQPEGDIFLYRPRPSATAPTGYLGRTTIVEFLVMNDE LRRAVMRRAGMGEIEQLARQAGMRTMYEDGLSKALRGETTIEEVLRVTEDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-87 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-87 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-86 | 50 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-87 | 49 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-85 | 47 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG0112 | Protein | 1e-75 | 47 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG1880 | Protein | 3e-80 | 45 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-66 | 44 |
| xpsE | NP_643851.1 | general secretion pathway protein E | VFG0233 | Protein | 5e-65 | 42 |
