Gene Information

Name : XAC3223 (XAC3223)
Accession : NP_643531.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : ISxac3 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3796230 - 3797036 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence :
ATGTGCCGGGTTTTGCGGGTGAACCGGGCTGGATACTACGCGTGGCTAAAGTCGCCCGACAGTGAACGCGCCAAGGAAGA
CGAACGCCTGCTGGGGCTGATCAAGCACCACTGGTTGGCCAGCGGCAGTGTCTATGGGCATCGCAAGATTGCCAAGGATC
TACGCGATCTGGGTGAGCGTTGCAGTCGCCATCGGGTGCATCGATTGATGCGCACCGAGGGACTGCGTGCCCAGGTGGGC
TATGGCCGCAAGCCGCGCTTCCATGGCGGAACGCCGTGCAAGGCGGCAGCCAACCTGCTGGATCGACAGTTCGACGTGAC
CGAGCCGGACACGGCCTGGGCGAGCGACTTCACCTTCATCCGTACGCATGAAGGCTGGATGTACCTGGCTGTGGTGATCG
ATCTGTTTTCCAGGCAGGTCGTCGGCTGGGCGATGCGCGATCGAGCCGATACCGAGTTGGTCGTGCAGGCCTTGCTGTCG
GCGGTGTGGCGGCGCAAACCCAGCGCTGGTTGCCTGGTTCATTCGGACCAGGGGTCTGTCTACACCAGCGATGACTGGCG
CAGTTTCCTGGCGTCCCATGGCTTGGTGTGCAGCATGAGTCGGCGTGGCAACTGCCACGAGCGCGAAGCCTGCCCTTGGG
GCACAACGCACCGGTGGAGAGCTTCTTTGGTCTGCTCAAACGCGAGCGGATCAGGCGGCGGATCTACCCCACCAAGGACG
CCGCACGCGCCGAGGTGTTCGACTACATCGAGATGTTCTACAACCCACAACGCCGTCATGGTTCAACTGGCGACCTGTCC
CCTGTAG

Protein sequence :
MCRVLRVNRAGYYAWLKSPDSERAKEDERLLGLIKHHWLASGSVYGHRKIAKDLRDLGERCSRHRVHRLMRTEGLRAQVG
YGRKPRFHGGTPCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQALLS
AVWRRKPSAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHEREACPWGTTHRWRASLVCSNASGSGGGSTPPRT
PHAPRCSTTSRCSTTHNAVMVQLATCPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-26 43
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-26 43
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-26 43
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-26 43
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-26 43
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-26 43
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-26 43
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 5e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC3223 NP_643531.1 ISxac3 transposase VFG1122 Protein 2e-26 43