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Name : clpB (XAC3195) Accession : NP_643503.1 Strain : Xanthomonas axonopodis 306 Genome accession: NC_003919 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3758596 - 3761211 bp Length : 2616 bp Strand : - Note : - DNA sequence : GTGCCGGCCACCTGTTCAGAGGATCTTCCCATGCGGATGGACAAGCTCACCTCGCGGTTCCAGCAGGCGCTGGCCGACGC GCAGTCGTTGGCTGTGGGCCGCGACCACAACATCATCGAGCCGGTGCACGTGCTGGCCGCGCTGCTCGACCAGAGCGGCG GCAGCACCCGACCGCTGCTGTCGCAGGCCGGCGTCAACGTGCCGCTGCTGCGCGAGCGCCTCGGCGAGGCGCTGGACACG CTGCCCAAGGTGTCCGGGCAGGAAGGCAATCTGTCGATCGGCAACGATCTCAATCGCCTGCTCAACCAGACCGACAAGCT TGCCCAGCAACATGGCGACGCGTTCATCGCCAGCGAATGGTTCGTGCTGGCCGCCGCCGACGATGCCAGCCCGCTGGGCG TGGCGTTGCGCGCTGCCGGCGGTGACAAGAAGAAGATCGAAGCGGCCATCGACAAGCTGCGTGGTGGCGAAACCGTGCAG TCGGAAAACGCCGAAGAACAGCGCCAGGCGCTGGAGAAATACACCATCGATCTGACCGCACGCGCCGAGAGCGGCAAGCT CGATCCGGTGATCGGCCGCGACGAAGAAATCCGCCGCACCATCCAGGTGCTGCAGCGCCGCACCAAGAACAACCCGGTGC TGATCGGCGAACCGGGCGTGGGCAAGACCGCCATCGTCGAGGGCCTGGCCCAGCGCATCATCAACGGCGAAGTGCCCGAA GGCCTGCGCGGCAAGCGCGTGCTGTCGCTGGACATGGGCGCGCTGATTGCCGGTGCCAAGTTTCGCGGCGAGTTCGAAGA ACGCCTGAAGGCGGTGCTCAGCGACCTGTCCAAGAACGAAGGCCAGATCATCCTGTTCATCGATGAGCTGCACACCATGG TCGGCGCCGGCAAGGCCGACGGCGCGATGGATGCCGGCAACATGCTCAAGCCGGCGCTGGCGCGCGGTGAGCTGCATTGC ATCGGCGCCACCACGCTGGACGAATACCGCAAGTACATCGAAAAAGATGCGGCATTGGAGCGCCGCTTCCAGAAAGTGTT CGTGGGCGAGCCGACGGTGGAAGACACCATTGCGATCCTGCGTGGGCTGAAGGAGCGCTACGCCGTGCATCACGGCGTGG AGATCACCGACCCGGCCATCGTGGCCGCCGCGACGTTGTCCAACCGCTACATCACCGACCGCCAGTTGCCGGACAAGGCC ATCGATTTGATGGACGAAGCGGCATCGCGCATCCGCATGGAGATCGACTCCAAGCCGGAGGAGCTCGATCGCCTGGAGCG CCGCCTGATCCAGCTCAAGATCCAGCGCGAGATGCTCAAGAAGGAAAAGGACGATGCCTCGCGGCAACGGCTGGCCGATC TGGAAACCGATATCGACAAGCTCGAGCGCGAGTTCTATGACCTCAACGAGCTGTGGAAATCCGAGAAGGCTGCGCTGCAG GGCACCACCAAGGTCAAGGAGCAGATCGAACACGCCAAGCTGGAACTGGAGGCCGCGCAGCGCCGCCAGGACTACGCCAA GATGAGCGAGATCCAGTACGGCGTGCTGCCGCAGCTGGAAAAGCAGATGGCGTTGGCCAACGAAGTCGAACACCACGATT TCAAGCTGGTGCAGGACCGCGTGACCGCCGAGGAAATCGCCGAAGTGGTGTCGCGCTGGACCGGCATTCCGGTCAACAAG ATGCTCGAAGGCGAGCGCGACAAGCTGTTGCGCATGGAAGACGAACTGCATCATCGCGTGGTCGGGCAGAACGAGGCGAT CAAGGTGGTGTCCGATGCGGTGCGCCGCTCGCGCGCCGGCCTGTCCGACCCGAACCGCCCCAGTGGCTCGTTCCTGTTCT TAGGTCCCACCGGCGTGGGTAAGACCGAGCTGTGCAAGGCGCTGGCGGATTTCCTGTTCGACAGCACCGAAGCGATGATT CGCATCGACATGAGCGAGTTCATGGAGAAGCATTCGGTCGCGCGCCTGATCGGTGCACCTCCTGGCTATGTGGGTTATGA AGAAGGCGGTTATCTCACCGAGGCCGTGCGTCGTCGTCCGTATTCGCTGATCCTGCTGGACGAAGTGGAAAAGGCGCATC CGGATGTCTTCAACATCCTGCTGCAGGTGCTCGACGATGGCCGCCTGACCGATGGCCAGGGCCGCACCGTGGACTTCCGC AATACCGTCATCGTGATGACCTCCAACCTGGGCTCGCACCAGATCCAGGAGCTGTCCGGCGACGATAGCGCCGAGGCGTA CACGCAGATGAAGGCCGCGGTGATGGGGGTGGTGCAGGCCCACTTCCGCCCGGAGTTCATCAACCGGCTGGACGACATCG TGGTGTTCCATCCGCTGGACAAGGCGCAGATCAAGTCGATTGCGCGCATCCAGTTGCAAGGCCTGGAAAAACGCCTGGCC GAGCGCGGCCTCAAGCTGGACCTGGACGATGCGGCGCTGGAGGTGCTGGGCAGTGTCGGCTTCGACCCGGTGTACGGCGC GCGTCCGCTCAAACGCGCGATCCAATCGCAGGTGGAGAACCCGCTGGCGCAGCAGATCCTGTCGGGCCAGTATCTCAGCG GCGATAGCGTGCGCGTGCGTGCCGACGGCGGACGGCTGGTGTTTACCAAGGACTGA Protein sequence : MPATCSEDLPMRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQAGVNVPLLRERLGEALDT LPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQ SENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE GLRGKRVLSLDMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHC IGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKA IDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQRLADLETDIDKLEREFYDLNELWKSEKAALQ GTTKVKEQIEHAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNK MLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMI RIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFR NTVIVMTSNLGSHQIQELSGDDSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLA ERGLKLDLDDAALEVLGSVGFDPVYGARPLKRAIQSQVENPLAQQILSGQYLSGDSVRVRADGGRLVFTKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-103 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-100 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_643503.1 | ATP-dependent Clp protease subunit | VFG0080 | Protein | 5e-127 | 44 |
