Gene Information

Name : XAC2989 (XAC2989)
Accession : NP_643298.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Virulence
Product : amino acid transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 3494767 - 3496149 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGACACACCACGCCGCGACGATGCGGCCACGCTGGAACGCTTCGGCTACGCACAGGAGCTCAAGCGGCAGCTCAC
GCTCAAGGATCTGTTGATCTACGGGCTGGTGTGCATGGTGCCCACGGCGCCGTTCTCGATCTTCGGCGGCGTCTTCGACA
TCAGTGCCGGGATGGTGCCGCTGACCTACCTGGTCGGCTTCGTGGCGATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCATTTCCGGTGGCGGGTTCGGTGTATGCCTATGTCGGGCGCGGGCTGAGCAGCGGCATGGGCTTTCTGGCCGG
CTGGGCGATTCTGCTCGACTACCTGCTGGTGCCGACCCTGCTGTATGTGGTCGGCGCCAATGCGATGCATACCGTGTTGC
CGGCGGTACCCCAGCCGGCGTGGATTGCGTTCTTCGTGGTGCTCAACACGGTGGTGAACCTGCGTGGCATCGAAACCACC
GCACGCGCCAATCGCTTTTTCCTGCTTGCGCAGTTGCTGGTGTTGGCGGTGTTCGTGGTGCTGGCGACGCTGGCGATCCA
GCGCGGCGTCAATGGGGCGCACTGGAGCTGGCGCCCGCTGTATAACCCACAAGCGTTTTCTCCGCAGTTGATCTTCAGCG
CGTTGTCGGTGGCGGTGGTGTCGTTCCTCGGCTTCGATGCAATCTCCACCATGTCCGAGGAAGCGCGCGGCGGCAACCGT
GTGGTGGGACGTGCAACCTTGCTGGCATTGCTGATCGTGGCAGGGCTGTTCGTCTTGCAAACCTGGCTGGCGGCATTGCT
GCAGCCCACCCTGCAGCGCTACCCAAGCGCGCAGGCATCCAACGATGCGTTCTTCGAGATCGGGCGATTGATCGCCGGGC
CATGGCTGCAGATCGTCATTGCGCTCACCGTGGCGATCAGCGCGGCAATCGCCAATTCATTGGTTGCACAGGCGGCCACC
TCGCGGCTGTTGTTCGCCATGGCGCGCGACCGGCAGTTGCCGGGCTTTCTGCGCTACATCCACCCACGCACCGGCGTGCC
GCAGCGCGCGATCCTGCTGGTGGCGGGCCTGAGTCTGGTACTGGGCGAAGTCTTCGTCGGGCAGATCGCGCTGCTGTCGT
CGCTGTGCAACGTCGGCGCACTGACCGCCTTCGTGCTGCTGCATATCGCAGTGCTGTGGCACTTCCGCACCCAGGGCCGG
CATGTGCTGCATGGCGCGGTGCCCTTGATCGGGATCGTCATCCTGGCCTACGTGCTGCTCAATGCCGATCTGCATGCACA
ACTGGGCGGCGCTGCGTGGATGGCGGTAGGGCTGGCGGTACTGGCGTTCTTGAAACTCAGCGGACGCTCCACCGAATTCC
GCGCCAGCGACGCGCTGGAATAG

Protein sequence : 
MIDTPRRDDAATLERFGYAQELKRQLTLKDLLIYGLVCMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSSGMGFLAGWAILLDYLLVPTLLYVVGANAMHTVLPAVPQPAWIAFFVVLNTVVNLRGIETT
ARANRFFLLAQLLVLAVFVVLATLAIQRGVNGAHWSWRPLYNPQAFSPQLIFSALSVAVVSFLGFDAISTMSEEARGGNR
VVGRATLLALLIVAGLFVLQTWLAALLQPTLQRYPSAQASNDAFFEIGRLIAGPWLQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPGFLRYIHPRTGVPQRAILLVAGLSLVLGEVFVGQIALLSSLCNVGALTAFVLLHIAVLWHFRTQGR
HVLHGAVPLIGIVILAYVLLNADLHAQLGGAAWMAVGLAVLAFLKLSGRSTEFRASDALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 3e-64 43
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 3e-64 43
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 6e-65 43
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 6e-65 43
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 5e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XAC2989 NP_643298.1 amino acid transporter VFG0480 Protein 1e-64 43