Gene Information

Name : kpsF (XAC2967)
Accession : NP_643276.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Virulence
Product : polysialic acid capsule expression protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3470768 - 3471769 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGTCTCGCACCTGCCCTCCGCCACCGTCAGCGACGCCACCCTGGTCGCCAGCGGCCAGCGCGTGCTGGAGATCGA
GCGCGAGGCGCTGGCCAGCGTGGGCGCACGCATCGGCCGCGAGTTCGCCGCGGCCTGCCGGCTGGTGCTGACCTCGCGCG
GCCGGGTGGTCGCCACCGGCATGGGCAAGTCCGGCCATGTGGCGCGCAAGATCGCCGCCACCCTCGCCTCGACCGGCACC
CCGGCGTTCTTCGTGCACCCGGGCGAAGCCGGACACGGCGACCTGGGCATGATCACCGAGGCCGACATCGTGCTGGCGCT
GTCGTACTCCGGGGAATCGGACGAAGTGCGCATGCTGCTGCCGGTGCTCAAGCGCCAGGGCAACCCGATCATCGCCATGA
CCGGCCGCACCAGTTCCACCCTGGCCCAGGCCGCCGACGTGCACCTGGACGTCAGCGTGTCGGCCGAAGCCTGCCCGCTG
CATCTGGCCCCCACCTCCAGCACCACCGCCTCGCTGGCGATGGGCGATGCACTGGCGGTTGCGCTGCTGGATGCGCGCGG
CTTCACCGCCGACGACTTCGCGCGCTCGCACCCGGCCGGCAGCCTGGGCCGGCGCCTGCTGCTGCACATCACCGATGTGA
TGCACGCCGGCGAGGACCTGCCGCGTGTGCGCGAAGACGCCAGCCTGAGCGAGGCGTTGATGGAAATGAGCCGCAAGCGG
CTGGGCATGACTGCCGTGGTGGACGCCGACGGCCATCTGATCGGGCTGTTCACCGACGGCGACCTGCGCCGCGCGCTGGA
CAGCGACATCGACGTGCGCAGCGCCGGCATCGCGCAGGTGATGACGCGCAACCCACGCACCATCGGCGCCGACCAGCTGG
CCGCCGAGGCCGCGCGGCTCATGGAGGACTACAAGATCAACGGCCTGATCGTGGTGGATGCGCAGCACCGCGCGGTGGGC
GCATTGAACATTCACGACCTGTTGCGCGCCAAGGTGGTTTAA

Protein sequence :
MAVSHLPSATVSDATLVASGQRVLEIEREALASVGARIGREFAAACRLVLTSRGRVVATGMGKSGHVARKIAATLASTGT
PAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPL
HLAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSEALMEMSRKR
LGMTAVVDADGHLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLIVVDAQHRAVG
ALNIHDLLRAKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-60 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 8e-61 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-60 44