Gene Information

Name : O (XAC2643)
Accession : NP_642954.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : phage-related capsid scaffold protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3108191 - 3109033 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGCCAAGGCCAAGAAGTTTCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCACGAT
TCAGCGCAGCTGGATCGATGACATGGCCGCCACCTACAACCGCGAGACCTACAACGCCCGCATCTGGATCGAGCACATGC
GCAGCCTGCTGCCGGATTCGCCGTTCCGTGCGTATGGCGATGTCACCGCCGTCAAGGCCGAAGAGGTGGAGATCGATGGC
ACCAAGCGTCTGGCGCTGTTCGCACAGATCGAGCCGACCGCCGATCTGATCACCATCAACAAGTCCAAGCAAAAGCTCTA
CACCAGCATCGAAGTGCAGGAGAAGTTCGCCAACACCGGCAAGGCGTATCTGGTCGGCCTGGCCGTGACCGATTCGCCGG
CCAGCCTGGGCACTTCCATGCTCAGCTTCGCGAGCCAAAACCCCGACGCCAATCCGCTTGCCGACCGCAAGCAGTCACCG
GGCAACCTGTTCACCGTTGCCGAAGAAACCGCGCTGGAATTCAGCGAAGTCAGCGAGGGGCCGGTCGCCAGTCTGTTGAG
CCGGATTCGCACTGCGCTCAAGAGCGAAGACGCCACCGCCATCACCGCCGAGCAGTTCGCAGACCTGGGCGAAGGCATCG
AACAGATCGCCGAGCACGTGCGCGGCCAGGACGAACGCTTCGACCGCCTGCAGGCCGAACACAACGAGCAGGCGACCAAG
CACGCGCAGCTGGCGGACGACCTGGCGCAGCTGCGCGCCTCGCTCTCACAGCAGCCTGACCCCGCACAACCCGCACGCCC
GGTGGTCACCGGCGGCGGCGCGGCCGTGCTGACCGACTGCTGA

Protein sequence :
MSAKAKKFRSNWFRVAVEGATTDGRTIQRSWIDDMAATYNRETYNARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDG
TKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLSFASQNPDANPLADRKQSP
GNLFTVAEETALEFSEVSEGPVASLLSRIRTALKSEDATAITAEQFADLGEGIEQIAEHVRGQDERFDRLQAEHNEQATK
HAQLADDLAQLRASLSQQPDPAQPARPVVTGGGAAVLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 1e-61 51
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 9e-45 47
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 9e-45 47