Gene Information

Name : XAC2424 (XAC2424)
Accession : NP_642739.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : ISxcd1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2826253 - 2827080 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence :
ATGGTGAGGCCATCTCAACGCCGGGAGATGGCCCGATGGGCGGTGGCGAACAAGGCGATGAGCATCCGGCACGCCTGCCA
GGCGTTTGAGGTCAGCCAGACCTGCTACCGCTATCAAGCCAAGGCCAGCGAGGAGAACGTCCAGATTGCCGATTGGCTTG
TCCGGTTGACCACGACCTATCGTGATTGGGGGTTCGGCCTATGCTTTTTGCACCTGCGTAACGTGAAGGGCTTCGGCTGG
AACCACAAGCGGGTGTACCGCATCTACCGGGAGCTGGAGTTGAACCTGCGGATCAAGCCAAAGAAACGACTGGTACGTGA
GCGGCCAGAGCCGTTGTCGGTACCGGAGGCGATCAACCAGGTCTGGTCGATGGATTTCATGCACGACCAGTTGGCCGATG
GTCGCAGCTTCCGGTTATTTAACGTGCTCGACGACTTCAATCGCGAGGGTCTGGGCATCGAGGTCGACCTGTCGCTGCCA
TCGGCCCGGGTGATCCGCTCGTTGGATCAGATCATCGACTGGCGCGGCAAGCCAAACGCCATTCGCTGCGACAACGGCCC
GGAGTACATCAGCGGCGCGCTGCTAGCTTGGGCACAGCAGCGCGGCATTCGGATCGAGCACATCCAGCCGGGCAAACCGC
AGCAAAATGCCTACGTCGAACGTTACAACCGCACCGTCCGCTACGCCTGGCTGGCCACAACATTGTTCGACACCATCGAG
CAGGTTCAGGACAAGGCCACGCGCTGGCTATGGACGTACAACCATGAGCGCCCCAACATGGCGCTCGGCGGTATCACCCC
AGCAATGAAATTGGCGATGGCCGCGTAG

Protein sequence :
MVRPSQRREMARWAVANKAMSIRHACQAFEVSQTCYRYQAKASEENVQIADWLVRLTTTYRDWGFGLCFLHLRNVKGFGW
NHKRVYRIYRELELNLRIKPKKRLVRERPEPLSVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREGLGIEVDLSLP
SARVIRSLDQIIDWRGKPNAIRCDNGPEYISGALLAWAQQRGIRIEHIQPGKPQQNAYVERYNRTVRYAWLATTLFDTIE
QVQDKATRWLWTYNHERPNMALGGITPAMKLAMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-54 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-38 41