Gene Information

Name : XAC2259 (XAC2259)
Accession : NP_642576.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 2640736 - 2642433 bp
Length : 1698 bp
Strand : +
Note : -

DNA sequence : 
GTGCGCCCCTTGCCACCCGTGGGCGGCCTGCCCCATCTGCACGGCATCGAGCCCGAAGAGATGGACGTCACCCTGCCGCT
GGGCGAACGGGTCGGCCACACGCTGGTGCTCGGCACCACGCGGGTCGGCAAGACCCGGCTGGCCGAACTGTTCATCACGC
AGGACATCCGCCGCCGCGCGGCGGATGGCGGGCACGAGGTGGTGATCGTGTTCGATCCGAAGGGGGATGCGGACCTGCTC
AAGCGGATGTACGTGGAAGCACGCCGCGCGGGACGCGAGAGCGAGTTCTACGTGTTCCATCTGGGCTGGCCGGACCTGAG
CGCGCACTACAACGCCATCGGCCGCTTCGGCCGCATCTCCGAAGTCGCCACCCGCATCGCGGGGCAACTGTCCGGGGAAG
GCAACAGCGCCGCTTTCCGTGAGTTCGCGTGGCGGTTCGTCAACATCATCGCCCGCGCGCTCGTGGAACTGGGGCAGCGA
CCGGACTACCTGCTGATCCAGCGGCACGTCATCAACATCGATGCGCTGTTCATGGAGTATGCGGCGCAGTTCTTCGCGAA
GACCGAACCCAAGGCCTGGGAGGTCATCGTCCAGCTCGAAGGCCGGCTCAACGACAAGAACATCCCGCGCAACATGATCG
GCCGCGAGAAGCGCGTGATCGCGATCGAGCAGTACCTCTCGCAGGTCCGCGTCTACGACCCGGTGCTCGACGGCCTGCGA
AGCGCCGTGCGCTACGACCGGACGTACTTCGACAAGATCGTCGCGAGCCTGCTGCCGCTGCTGGAGAAGCTCACCACGGG
CAAGGTCGCCCAGTTGCTGGCGCCGAATTACTCGGACCTCGCCGATCCGCGGCCGATCTTCGACTGGATGCAGATCATCC
GCAAACGCGCGATCGTGTACGTGGGACTGGACGCGCTCTCAGATGCGGAGGTGGCGGCCGCCGTGGGCAACTCGATGTTC
TCGGACCTGGTCTCGGTCGCGGGGCACATCTACAAGTTCGGCGTGGACGACGGCCTGCCGGGTGCGAATGCGAATTCCAA
GGTGCCCATCAACGTCCATGCCGACGAGTTCAACGAGCTCATGGGCGATGAATTCATTCCCATGGTCAACAAGGGCGGCG
GTGCCGGCGTCCAGGTCACGGCGTACACCCAGACGCTCTCCGATATCGAGGCGCGCATCGGCAATCGCGCGAAGGCGGGA
CAGGTCGTGGGGAATTTCAACAACCTGGTCATGCTGCGGGTGCGAGAGACGGCCACGGCCGAGCTGCTGACGCGCCAGTT
GCCCAAGGTCGAGGTGTTCGCGACCTCGGTGATGAGCGGCGCCACGGACAGCTCCGATCCCACGGGCAACACCGCGTTTA
CCTCGAACACCCAGGACCGCATCGCCAGTACCAGCGTGCTGATGATCGAGCCCGCGCACGTAGTGGCGTTGCCGAAGGGC
CAGGCCTTCGCGCTGATGGAAGGTGGCAACCTCTGGAAGGTGCGCATGCCGCTGCCCGCGCCCGATCCCGACGAGGCCAT
GCCGCGCGATCTGCAGGAGCTCGCTGCCGGCATGCGGTTGCACTACGTCGAGGCGGGCGCATGGTGGGATGGACAGATCG
CGCCAGGGCTGCAGGACGCAACCTTGCCCGACGATCTACTGGCAGGTTTCGCGCCGCCGGAGGACGCAGGCGGAAACCCT
GGAGCTGCGGCGCCATGA

Protein sequence : 
MRPLPPVGGLPHLHGIEPEEMDVTLPLGERVGHTLVLGTTRVGKTRLAELFITQDIRRRAADGGHEVVIVFDPKGDADLL
KRMYVEARRAGRESEFYVFHLGWPDLSAHYNAIGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQR
PDYLLIQRHVINIDALFMEYAAQFFAKTEPKAWEVIVQLEGRLNDKNIPRNMIGREKRVIAIEQYLSQVRVYDPVLDGLR
SAVRYDRTYFDKIVASLLPLLEKLTTGKVAQLLAPNYSDLADPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMF
SDLVSVAGHIYKFGVDDGLPGANANSKVPINVHADEFNELMGDEFIPMVNKGGGAGVQVTAYTQTLSDIEARIGNRAKAG
QVVGNFNNLVMLRVRETATAELLTRQLPKVEVFATSVMSGATDSSDPTGNTAFTSNTQDRIASTSVLMIEPAHVVALPKG
QAFALMEGGNLWKVRMPLPAPDPDEAMPRDLQELAAGMRLHYVEAGAWWDGQIAPGLQDATLPDDLLAGFAPPEDAGGNP
GAAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG68 AAN62290.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 86
ORF C65 AAN62159.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 83
traG CAI36113.1 putative TraG family conjugative protein Not tested PPHGI-1 Protein 0.0 75
EXA47 ABD94656.1 TraG/TraD family protein Not tested ExoU island A Protein 0.0 72
unnamed ABR13375.1 hypothetical protein Not tested PAGI-5 Protein 0.0 72
RL047 AAP84173.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 71
STY4562 NP_458648.1 hypothetical protein Not tested SPI-7 Protein 3e-168 66
t4260 NP_807858.1 hypothetical protein Not tested SPI-7 Protein 3e-168 66
YE3493 YP_001007651.1 TraG-family protein Not tested YAPI Protein 4e-167 65
PMI2588 YP_002152307.1 plasmid transfer protein Not tested Not named Protein 1e-163 65
YpsIP31758_3718 YP_001402672.1 hypothetical protein Not tested YAPI Protein 2e-166 64
api27 CAF28501.1 hypothetical protein Not tested YAPI Protein 3e-165 64
Pmu_03190 YP_005176218.1 conjugal transfer protein TraD Not tested ICEPmu1 Protein 6e-168 63