Gene Information

Name : orf8 (XAC2243)
Accession : NP_642560.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : plasmid-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 2624846 - 2627146 bp
Length : 2301 bp
Strand : +
Note : -

DNA sequence :
ATGCCCCATTTTTCATGGAGCATCACCATGTCCTTCGAAATCGATACCGCCGCGGACAACGCACCCGTGCAGGGCGACCT
GCTCGGCGCGGAGCCTTCTCCCCTGGAGCTGAGCCTCACTGAGTTCGTCGCCGAGTTCGGCGACGAACTGCTGGAGTCCC
TCAACCGCGCCAACCCACCGGTCTACAGCGGCCAACCCAGAGCCCATCGCCAGCGCATCGTCGCCGGCCTCAAGCGCAGG
CTGTTTCCCGCGCAGGCCGAGGTGGTCCATGCCGCCGCCGAACTGCTGATCGACCGCGGCGAGCGTGCCGCGATCGTCAA
CGGCGAAATGGGCTGCGGCAAGACGACCGTGGGCATCGCCACGGCCGCCGTGCTGCACGCCGAAGGCTACCGCCGCACGC
TTGTGCTGTCGCCGCCGCACCTGGTCTACAAGTGGCGGCGCGAAATCCTCGAAACGGTTGCCGGTGCCAGGGTCTGGGTG
CTCAACGGCCCGGATACCCTGGTCAAACTCATCAAGCTGCGCGAGCAGTTGGGCGAGCGGCCCACCGGCCAGGAGTTCTT
CGTCCTCGGCCGGGTGAGGATGCGGATGGGCTTTCACTGGAAGCCCGTCTGCGCGGTGCGGCGCACCCGCCACGGCGACG
TGGCGACGTGCCCCGACTGCGGCCATGTCGTCACCGACCTCGACGGCGAGCCGGTCCATCCGGCCATGCTGGACGAGGAC
GAGCACCGCAGAAAGTGCGGCCACTGCGCCGCGCCCTTGTGGACGCTCATGCGGCCCGAGAGCCTGTCCGGCAACGCCCA
GTCCTCGGCCGTCGCCAAGGCGCTCCAGCGCATTCCCACGATCGGCGAAGCCACCGCGCAGAAGCTGATGCGAAAGTTCG
GCGACGGCTTTCTGGCCTCGATGCTGGGCGACAACATCCACGAGTTCATCAACCTGATGGACGCCAATGGCGAACTGGTG
TTCTCTGACCGGCAGGCCACGCGCATGGAGCGCGCCATGGCGAACATGGAGTTCGGTTTCGGCGAGGGCGGCTACCAGCC
CACGGAGTTCATCAAACGCTACCTGCCGCAAGGCACGTTCGACCTGCTGATCCCGGACGAGGCGCACGAGTACAAGAACG
GGGGCAGTGCCCAGGGCCAGGCGATGGGTGTGCTGGCCGCGAAGTGCCGCAAGGCATTGCTGCTCACCGGCACGCTGATG
GGTGGATACGGCGACGACCTGTTCTATCTGCTGTTCCGCGCCCTGCCCGGGCGGATGATCGAAGACGGCTACCGGCCGGC
GAAGAATGGCTCGATGACCTCGGCGGCGATGGCGTTCATGCGTGACCACGGGGTGCTGAAGGACATCTATTCCGAGAGCG
CCGGCACGGCGCACAAGACCGCCAAGGGCAGCAAGACCAGTGTCCGAACGGTCAAGGCACCGGGCTTCGGTCCCAAGGGT
GTGCTGCGGTGCGTGCTGCCGTTCACGATCTTCCTCAAGCTCCGGGACCTCGGGCGTGACGTGCTGCCCCCGTACGACGA
GGAGTTCCGCGAAGTTCCGATGGCGCCCGCGCAGGCCAGCGCCTACAGCGCGCTCTCGATCGCGCTCACCAGCGCGTTGC
GCCAGGCCCTGGCCCGTCGCGACACGACGCTCCTCGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGACACGTGCTTC
CGCGCGGAAAACGTCGTGCATCCACGCACACGCGACACGCTGGCTTTCGTCCCCGCCCAGTTCCACGACGCGCAGGCGAT
GCCCAAGGAACGGGAGTTGATCGACATCTGCCGCCAGGAGAAGGCGCAGGGCCGCAAGACGCTCGTCTACACGGTGTACA
CCGGAACGCGCGACACGACCTCGCGTCTCAAGCGGCTGCTCGAAGTCGAGGGCTTCAAGGTGGCCGTGCTCCGCGCCAGC
GTGGACGCGAGCCGCCGCGAGGACTGGATCGCCGAGCAGCTGGACCGCGGCATCGACGTGCTCATCACCAATCCGGAGCT
GGTCAAGACCGGACTGGATCTGCTGGAGTTTCCGACCATCGTGTTCATGCAATCGGGCTACAACGTGTACTCGTTGCAAC
AGGCAGCACGGCGCTCATGGCGCATCGGCCAGACGCAATGCATCAAGGTGATCTATCTCGGCTACGCCGCTTCTTCGCAA
ATGAGCTGCCTGAAGCTGATGGCCCAGAAGATCATGGTGGCGCAGAGCACTTCGGGAGACATCCCGGAGAGCGGGCTCGA
TGTGCTGAACCAGGACGGGGATTCCGTCGAAGTCGCGCTCGCGCGGCAACTGGTGAACTGA

Protein sequence :
MPHFSWSITMSFEIDTAADNAPVQGDLLGAEPSPLELSLTEFVAEFGDELLESLNRANPPVYSGQPRAHRQRIVAGLKRR
LFPAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLHAEGYRRTLVLSPPHLVYKWRREILETVAGARVWV
LNGPDTLVKLIKLREQLGERPTGQEFFVLGRVRMRMGFHWKPVCAVRRTRHGDVATCPDCGHVVTDLDGEPVHPAMLDED
EHRRKCGHCAAPLWTLMRPESLSGNAQSSAVAKALQRIPTIGEATAQKLMRKFGDGFLASMLGDNIHEFINLMDANGELV
FSDRQATRMERAMANMEFGFGEGGYQPTEFIKRYLPQGTFDLLIPDEAHEYKNGGSAQGQAMGVLAAKCRKALLLTGTLM
GGYGDDLFYLLFRALPGRMIEDGYRPAKNGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGSKTSVRTVKAPGFGPKG
VLRCVLPFTIFLKLRDLGRDVLPPYDEEFREVPMAPAQASAYSALSIALTSALRQALARRDTTLLGVVLNVLLAWPDTCF
RAENVVHPRTRDTLAFVPAQFHDAQAMPKERELIDICRQEKAQGRKTLVYTVYTGTRDTTSRLKRLLEVEGFKVAVLRAS
VDASRREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQTQCIKVIYLGYAASSQ
MSCLKLMAQKIMVAQSTSGDIPESGLDVLNQDGDSVEVALARQLVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C71 AAN62165.1 conserved hypothetical plasmid protein Not tested PAGI-2(C) Protein 0.0 87
ORF SG81 AAN62302.1 conserved hypothetical plasmid protein Not tested PAGI-3(SG) Protein 0.0 83
RL063 AAP84188.1 plasmid related protein Not tested PAPI-1 Protein 0.0 70
unnamed ABR13404.1 putative helicase Not tested PAGI-5 Protein 0.0 70
pph67 CAI36108.1 superfamily II DNA/RNA helicase Not tested PPHGI-1 Protein 0.0 69
yea AAW83099.1 Yea Not tested GGI Protein 7e-180 50