Gene Information

Name : ssb (XAC2211)
Accession : NP_642528.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2595501 - 2595887 bp
Length : 387 bp
Strand : +
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGAGCACCCACTTTCATGGCGAAGGCAACATCGGCTCGCCCCCGAAGTTCGACGAGTATCCCAATGGCAACGAAGAGCC
GCGGCGGGTGCTGCGCCTCAACGTTTATTTCGATAATCCTGTGCAGAACAAGGACGGCGCCTACGACGACCGCGGCGGCT
TCTGGGCGCCCGTGGACTGGTGGCACCGCGACGCGGAGCGTTGGGCCACGCTGTTCGCCAAGGGCATGCGCGTGGCGGTG
CGCGGGCACCTGGAACGCGACGACTGGACCGACGGTGATGGCGAGCCGCACACGACCTACAAGGTGGACGCGCGCAGCGT
GGGTATCCTCCCGTACCGCCTGGACGCGGTGCATCTGAGCCCCAAGCCGGGCACCACCGGCGAGTAG

Protein sequence :
MSTHFHGEGNIGSPPKFDEYPNGNEEPRRVLRLNVYFDNPVQNKDGAYDDRGGFWAPVDWWHRDAERWATLFAKGMRVAV
RGHLERDDWTDGDGEPHTTYKVDARSVGILPYRLDAVHLSPKPGTTGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 2e-39 68
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 4e-40 67
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 1e-28 56
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 8e-26 53
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 2e-26 52