Gene Information

Name : glnA (XAC0204)
Accession : NP_640560.1
Strain : Xanthomonas axonopodis 306
Genome accession: NC_003919
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 250876 - 252285 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGCTTCGTCGATATGCGTGG
TGTACAGCAGCACATCACCTTTCCGGTCAATATCATCGAGCCGGCGCTGTTTGAAGAAGGCAAGATGTTCGACGGCAGTT
CGATCGCGGGCTGGAAGGGCATCAACGAGTCGGACATGGTGTTGCTGCCGGACGCGGGCACCGCGTATCTGGATCCGTTC
TTCGCCGATCCGACCATCGTGCTGACCTGCGACATCCTCGACCCGGCCACCATGCAGAGCTATGAGCGCGATCCGCGCGG
CATCGCCAAGCGCGCCGAGGCCTATCTGAAATCCTCCGGCACCGCCGACCAGGCGTTCTTCGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTGCGCTTTGCCAACGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAAGCGGCCTGGAAC
ACCGGCGAAAAGTACGACGGCGGCAACAGCGGTTACCGCCCGGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGACCGA
CAGCCTGCACGACCTGCGCGCGGAAATGATCAAGACGCTGGAACAGGTCGGCATCGAAACCGAAGTGCACCACCACGAAG
TGGCCACCGCCGGCCAGTGCGAGATCGGCACCAAGTTCAGCTCGCTGGTGCAGAAGGCCGACGAACTGCTGACGATGAAG
TACATCATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTGGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGCTGGCCAAGGGCGGCGTCAACCTGTTCACCGGCGACGGCTACGGCGGCCTGTCGCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCATGCCCGCGCGATCAACGCCTTCGCCAACTCCGGCACCAACAGCTAC
AAGCGTCTGGTCCCGGGCTTCGAGGCGCCGGTGATGCTGGCCTATTCGGCGCGTAACCGTTCGGCGTCGTGCCGCATTCC
CTGGGTCACCAATCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGATCCGGGCGCACCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATCCCGCAGGTTTGCTCCAGCCTGGACCAGGCGCTGGAAGCGCTGGACAAGGACCGCGA
GTTCCTCAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTATATCGCGCTGAAGATGCAGGAAGTCACCAAGT
TCCGTGCTGCGACCCACCCGTTGGAGTACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPVNIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPF
FADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWN
TGEKYDGGNSGYRPGVKGGYFPVPPTDSLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMK
YIIKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLAKGGVNLFTGDGYGGLSQLALWYIGGIFKHARAINAFANSGTNSY
KRLVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_640560.1 glutamine synthetase VFG1399 Protein 2e-108 51