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Name : serS (CJE0438) Accession : YP_178457.1 Strain : Campylobacter jejuni RM1221 Genome accession: NC_003912 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 391965 - 393200 bp Length : 1236 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGATTTAAAAAATTTGCAAAATAATTTTGATGAAGTGGCTAAAAAGTTAAAAAATAAAAAAGTTGATGAAAATAT CTTAAAAAAACTTGCTGAACTTTTTGCAAGTTTAAAAAAAGAAAAAATAGCCTTGGAAGAATTTCAAGCTTTTCAAAATA AATTCAGTAAAGAGCTTGCTACAGCCGAAGATAAAGAAAGTTTAAAAGCAAAATTAAGCGAAAATAAAAGCAAAATTAAT GAGCAAAGCGCTAAAGTAAATGCTTTAGAAAATGAGCTTGAGGAAATCGCTCATGCCATCCCAAATATCCCTGATGAATG TGTGCCTGTGGGTGAAGATGAAAATGAAAATGTGGAGCTTAAAAAAGTTTTAAATCCACCTAGCTTTGATTTTACTCCAA AAGAACATTTTGAATTAGGCGAGAGTTTAAATTGGCTTGATTTTATACGTGGGGTAAAAATTTCACAAAGTCGTTTTTGT GTGCTTAAAAATGAAGGAGCTTTATTAAGCCGTGCTTTGGTAAATTATATGATAGATTTTAATAGAAGTCGTGGATTTGA ATTTGTTAATGTACCTTTTTTGGTAAATGGTGCTACTATGTTTGGGACGGGTCAGTTGCCAAAATTTAAAGAAGATATGT ATAAGGTAGATGATGAGGATTTGTATTTGATCTCAACTTCTGAAATTCCAGTAACCAATCTTTACAGCGGAGAAATTTTA GCGAGTGAAACTTTACCTATAAAAATGACTTGTTATAGTGCTTGTTTTAGAAAAGAAGCAGGCAGTGCAGGGCGTGATAC AAGGGGTATTATAAGACAACACCAGTTTGAAAAAGTAGAGCTTGTAAGTATCACTAAAACTGAGCAAAGTGATAGTGTGT TTAATGAAATGCTTGAGTGTGCAAGTGATTTGCTGAGTTCTTTAGGTTTAGCGCATAGACATTTGATGCTTTGCACTGGA GATTTGGGTTTTAGTGCAGCAAAAACTGTAGATCTTGAAGTGTGGCTTCCAGGACAAAATAAATATCGTGAGATCAGCTC GGTTTCAAATTGTCGTGATTTTCAAGCAAGACGCGCTAAAATTCGCTATAAAAACGAACAAGGAAAAAATGAACTCGTCC ACACTCTTAATGGCTCATCTTTGGCAGTAGGAAGAACCTTGGTAGCGATTATGGAAAATTATCAAGATAAAGAAGGAAAA ATTCATATTCCTGATGTTTTGAAAAAATATTTTTAA Protein sequence : MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKIN EQSAKVNALENELEEIAHAIPNIPDECVPVGEDENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFIRGVKISQSRFC VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEIL ASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKTEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTG DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGK IHIPDVLKKYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-85 | 48 |
