Gene Information

Name : CJE1835 (CJE1835)
Accession : YP_179805.1
Strain : Campylobacter jejuni RM1221
Genome accession: NC_003912
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1728672 - 1729325 bp
Length : 654 bp
Strand : +
Note : identified by similarity to GB:AAK02532.1; match to protein family HMM PF00005

DNA sequence : 
ATGATGAAAAAAGAACTTATTAAAATAAACAACTTAAATAAAGAATTTGGCAAAGTTAAAGCCTTAAACAATATCAACTT
AAGCGTCTATGAAGGAGAATGGCTTGCCATCATGGGTCCATCAGGAAGTGGAAAATCAACGCTTTTAAACATACTATCAC
TCATGGATGCTCCAAGCTCTGGAGAGTATATCTTAGACAATGAAAACCTAGAGCAAATGGATGAGGAGCAAAAAATCACC
TTGCGTCGTGAAAAAATAGGACTTGTCTTTCAACAATTTCATCTTATCCCCTATCTTAACGCTTTAGAAAATGTTATGCT
TTCTCAGTATTATCACTCAAGCGTAGATGAAGAAGATGCCAAAATGGTTCTTGAAAAAGTAGGACTTTCACATAGACTCA
CTCATTTACCTAGCCAATTAAGTGGCGGGGAACAACAAAGAGTTTGTATAGCAAGAGCTTTGATCAACAACCCAGAGCTT
TTACTCGCAGATGAACCTACAGGAAATTTAGATGAAGCCAATGAACAAATCGTTCTTCAAACCTTGCAAAAATTAAAAAA
TGAAGGCAAAACCATAGTTTTAATCACACACAATCCTGATTTAGCCAAATTCGCAGATCGAACCCTTATCTTACAACATG
GGGTGTTAAAATGA

Protein sequence : 
MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDAPSSGEYILDNENLEQMDEEQKIT
LRREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJE1835 YP_179805.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-45 50
CJE1835 YP_179805.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 6e-26 44
CJE1835 YP_179805.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-30 44
CJE1835 YP_179805.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 44
CJE1835 YP_179805.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-32 44