|
Name : katA (CJE1576) Accession : YP_179559.1 Strain : Campylobacter jejuni RM1221 Genome accession: NC_003912 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 1477005 - 1478429 bp Length : 1425 bp Strand : + Note : identified by similarity to SP:Q59170; match to protein family HMM PF00199 DNA sequence : ATGAAAAAATTAACTAACGATTTTGGAAACATTATAGCCGATAACCAAAATTCATTAAGTGCAGGCGCAAAAGGACCTTT GCTTATGCAAGATTATCTTTTGCTTGAAAAACTTGCTCATCAAAATAGAGAAAGAATTCCAGAAAGAACCGTTCATGCCA AGGGAAGTGGGGCTTATGGAGAAATAAAAATCACCGCTGATTTATCTGCTTATACTAAGGCAAAAATATTTCAAAAAGGA GAAATAACTCCTCTTTTCCTACGCTTTTCTACTGTTGCAGGTGAAGCAGGTGCAGCAGATGCTGAGCGTGATGTGAGAGG TTTTGCCATTAAATTTTACACCAAAGAAGGAAACTGGGATTTAGTAGGAAATAATACTCCAACTTTTTTTATCCGTGATG CGTATAAATTTCCTGATTTCATTCATACTCAAAAAAGAGATCCAAGAACTCATCTAAGAAGTAATAATGCTGCTTGGGAT TTTTGGAGTTTATGTCCTGAAAGTTTACATCAAGTAACCATTCTTATGAGCGATAGAGGAATTCCTGCAAGTTATCGTCA TATGCATGGATTTGGAAGCCATACTTATAGTTTTATTAATGATAAAAATGAAAGATTTTGGGTGAAATTCCATTTTAAAA CCCAACAAGGGATTAAAAATCTTACCAACCAAGAAGCTGCCGAGCTTATAGCAAAAGATAGAGAAAGTCATCAAAGAGAT CTCTATAATGCTATAGAAAATAAAGATTTTCCAAAATGGAAAGTTCAAGTTCAAATTCTTGCTGAAAAAGATATAGAAAA ACTTGGATTTAATCCTTTTGATTTAACAAAAATTTGGCCTCATAGTCTTGTGCCTTTGATGGATATAGGCGAAATGATTC TAAACAAAAATCCTCAAAATTATTTTAATGAAGTTGAACAAGCTGCCTTTAGTCCAAGCAATATCGTTCCTGGAATTGGC TTTAGCCCTGATAAAATGTTGCAAGCTAGAATTTTTTCATATCCTGATGCACAAAGATATAGAATAGGAACTAATTATCA TCTTTTACCAGTAAATCGTGCAAAAAGCGAAGTGAATACTTACAATGTCGCTGGTGCTATGAATTTTGATAGTTATAAAA ATGATGCTGCTTATTATGAACCAAACAGCTATGATAATAGCCCAAAAGAAGACAAAAGCTATCTTGAACCTGATTTAGTC TTAGAAGGCGTAGCACAAAGATATACTCCACTAGATAATGACTTTTATACTCAACCAAGAGCTTTATTTAATCTTATGAA TGATGATCAAAAAACTCAACTTTTTCATAATATCGCCGCTTCTATGGAGGGAGTTGATGAAAAAATTATCACTAGAGCTT TAGAACATTTTGAAAAAATTTCACCTGATTATGCAAAAGGAATTAAAAAAGCTTTAGAAAAATAA Protein sequence : MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRERIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKG EITPLFLRFSTVAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLTNQEAAELIAKDRESHQRD LYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIG FSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLV LEGVAQRYTPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKIITRALEHFEKISPDYAKGIKKALEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 9e-124 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-96 | 55 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-96 | 46 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-96 | 46 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-96 | 46 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-96 | 46 |
