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Name : SPO0921 (SPO0921) Accession : YP_166174.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 973916 - 976948 bp Length : 3033 bp Strand : + Note : identified by match to protein family HMM PF00873 DNA sequence : ATGAACATCGCGCGCCTGTCGATCGAAAAGCCGCTTTATACCTGGTTGATCATCCTGATTTCGCTGGTCGGCGGCATCTG GGGCTTTGCCACGCTGGGCCGGCTGGAAGACCCGGCCTTTACCATCAAACAGGCGGTCATCGCCACGCAGTATCCCGGGG CGACCGCCGAACAGGTGGCGCTGGAGGTCTCTGAACCGCTGGAATCGGCGATCCAGAAGATGGACGAGGTGGATATCATC ACCTCGGTCAACCAGCCGGGCCAGTCGCTGATCGAGGTCGAGATCAAGTCGACCTATGACGGGGGCGAGCTGCCCGCGAT CTGGACCAAGCTGCGCGCCCGGGTGGGCGATGCCGCCCGCACCCTGCCCGACGGGGTCAGCGCCCCCTTTGTCAATGACA GTTTCGGCGATGTCTATGGCCTGTTCTATGCGGTGACCGCACCGGGATACAGCGATGCGGAACAGCACGAACTGGCCACC TGGCTGCGGCGCGAGCTGCTGGCGGTGCCCGGAGTGGCCGGGGTCGAGGTGGCGGGGCTGCCGGACGAGGCGATATTCGT CGAACCCGATCTGGCGCTGTCGGTGAACCAGAACGTGCCGGTGCAGGCGATTGCCAATGCCATTGCCACCGCCGATTCCG TGCGCGACGCAGGCACCCTGCGCAACGGGGACGGCAAGACCGCGATCCTGCGACCCGAAGGCTCGGACAGTGTGGACGCC ATTGCGGGCCTGTCGGTGGGCACGCAAGGCAAGGTGATCAACCTGTTCGACATGGCGCAGGTGCATCGGGGGCGTCAGGC CGACCCGGACCTGATCATCCGCCATAACGGGGGTGAGGCGTTCTCGCTGGGCATTGCCGGGTTGGCGACCGAGAACATTG TCGAGGTGGGCCAACGGGTGGATGCCCATCTGGCGGAACTGGACGGCGATATCCCCGCCGGCGTGACGCTGGAACCTATC TATCAGCAGCATGTGGTGGTCGAGGAGGCGAGCAACGCTTTCCTCGTCAACCTGGCCATGTCGGTGGCCATCGTGGTGGC GGTGCTGGCGCTGTTCATGGGCTGGCGCGCGGCGGTTGTGGTGGGGGCGACCCTGCTCTTGACCGTGGTCGGCACGCTTC TCTTCATGGCGCTGTTTTCCATCGAGATGGAGCGGATCTCGCTGGGTGCGCTGATCATCGCCATGGGGATGCTGGTGGAC AATGCCATCGTGGTGGCCGAGGGGATGCAGATCGCCATGCTGCGCGGCAAACCCTCGCGCGCGGCCGCGGACGAGGCGGC GGGCAAGACGCAGATCCCGCTGTTGGGCGCCACCGTGATCGGGATCATGGCCTTTGCCGGGATCGGCCTCAGCCCCGATG CGACGGGCGAGTTCCTGTTCTCGCTCTTTGCCGTGATCGGCATTTCGCTGCTCTTGAGCTGGGTGTTGGCGCTGACGGTG ACGCCGCTGTTGGGGCATTACTTTTTCAAGCAGGGGCATGCGGATGCCGCCGATGCCTATGGCGGGCCGCTGTTTCGCGC CTATGCCGCCACTCTCAGGGCCGCGTTGCGGCTGCGCTGGCTGGTGGTTGTGGGGCTGGTTGCGGTAACGGCGGCCTGTT TCGCGGGCTTTGGCCTGATGAAGCAGCAGTTCTTTCCCAATTCGAACACGCCGCTGTTCTTCGTGCATTACAAGCTGCCG CAGGGCACGCCGATCGAGACCACCGCCGGTGATCTGGCCCGGGTCGAGGCCTGGCTGAACAAGCGTTCGGACGTTCTGGC TTACACCACATTTGCCGGGCAAGGCGCGACGCGGTTCATGCTGACCTATGCGGCGGAGAAGCCGAACCCCTCTTACGGCC ATATGATCGTGCGAACGGCGAGCATCGAGGATATCCCCGCGCTTCAGGCCGATCTTGAGGCGTTTGGCACCGCCACCTTC CCCGAAGGCGAGTTTCGCACCAGGCGGCTGGTCTTTGGCCCCGGCGGCGGCGACCCGATCCAGGTGCGGTTCTCGGGGCC CGATCCGGCAGTGCTGCGGCAGCTGGCCGATACGGCGATGGGCGAGATGCGGGCGGCCTCGGACAATATCACCGGCGTGC GGTCAAACTGGTACGAGCAGGAACTGGCGCTGCGCCCCGTCTATGCCACCGAGCGGGCGCAGATCGCGGGCGTCAGCCGC GACGATATCGCCGACATGCTGCGGTTTTCCACCGATGGCATCACCAGCGGGGTGCTGCGCGAACGCGACCGGCTGATCCC GATCATCGTGCGCCGCCCCGCCGATGGGCCCTATTCCATCGTCGATCAGGTGGTCTATTCGCCGCTGTCCGAGACATTCG TACCGGTCGAACAGATGGTGGACGGGTTCGAATACGAGGCGGTCAATACGCTGGTGCATCGCCGCGACCGGCTGTTGACG GTGACCGTGGGCGCCGACATTCCCGCCGATCTGACCGCAGCCCAGGTGCATGCCGAGGTGCGCCCGGTCATCGAGGCGAT CGACTTGCCTCCGGGTTACCGGATGGAATGGGGCGGCGAGTTCGAGGATTCAGCAAAAGCGCAGGAGAGCCTGGGCAAGC AATTGCCGCTGAGCCTGTTGATCATGGTGCTGATCTCGATCCTGCTGTTCAACGCGATCCGCCAGCCGGTGATCATCTGG CTTTTGGTGCCGATGTCGGTGAACGGGGTGGTGATCGGCCTGTTGGGCACCGGGTTGCCGTTCACCTTTACCGCGCTTCT GGGTCTCTTGAGCCTGTCGGGGATGCTGATCAAGAACGGCATCGTGCTGGTCGAGGAGATCGACCTTGTTAGGGCCGAGG GCAAGCCGCTGCGCGCGGCCATTGTCGAGGCCTCGGTATCGCGGATCCGGCCCGTTATGCTGGCCGCTGTCACCACCATT CTGGGCATGGCGCCGCTGTTGTGGGATGCGTTCTTTGTCTCGATGGCGGTGACCATCATGGGCGGGCTGGCATTCGCCAC CGTGCTGACCCTGATCGCGGCGCCGGTGTTCTATGACCTGTTCTTCAGCCGCGAGGCGCGGGCCGGGGCCTGA Protein sequence : MNIARLSIEKPLYTWLIILISLVGGIWGFATLGRLEDPAFTIKQAVIATQYPGATAEQVALEVSEPLESAIQKMDEVDII TSVNQPGQSLIEVEIKSTYDGGELPAIWTKLRARVGDAARTLPDGVSAPFVNDSFGDVYGLFYAVTAPGYSDAEQHELAT WLRRELLAVPGVAGVEVAGLPDEAIFVEPDLALSVNQNVPVQAIANAIATADSVRDAGTLRNGDGKTAILRPEGSDSVDA IAGLSVGTQGKVINLFDMAQVHRGRQADPDLIIRHNGGEAFSLGIAGLATENIVEVGQRVDAHLAELDGDIPAGVTLEPI YQQHVVVEEASNAFLVNLAMSVAIVVAVLALFMGWRAAVVVGATLLLTVVGTLLFMALFSIEMERISLGALIIAMGMLVD NAIVVAEGMQIAMLRGKPSRAAADEAAGKTQIPLLGATVIGIMAFAGIGLSPDATGEFLFSLFAVIGISLLLSWVLALTV TPLLGHYFFKQGHADAADAYGGPLFRAYAATLRAALRLRWLVVVGLVAVTAACFAGFGLMKQQFFPNSNTPLFFVHYKLP QGTPIETTAGDLARVEAWLNKRSDVLAYTTFAGQGATRFMLTYAAEKPNPSYGHMIVRTASIEDIPALQADLEAFGTATF PEGEFRTRRLVFGPGGGDPIQVRFSGPDPAVLRQLADTAMGEMRAASDNITGVRSNWYEQELALRPVYATERAQIAGVSR DDIADMLRFSTDGITSGVLRERDRLIPIIVRRPADGPYSIVDQVVYSPLSETFVPVEQMVDGFEYEAVNTLVHRRDRLLT VTVGADIPADLTAAQVHAEVRPVIEAIDLPPGYRMEWGGEFEDSAKAQESLGKQLPLSLLIMVLISILLFNAIRQPVIIW LLVPMSVNGVVIGLLGTGLPFTFTALLGLLSLSGMLIKNGIVLVEEIDLVRAEGKPLRAAIVEASVSRIRPVMLAAVTTI LGMAPLLWDAFFVSMAVTIMGGLAFATVLTLIAAPVFYDLFFSREARAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 1e-147 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SPO0921 | YP_166174.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 8e-163 | 44 |
| SPO0921 | YP_166174.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 8e-160 | 44 |
| SPO0921 | YP_166174.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 4e-155 | 43 |
| SPO0921 | YP_166174.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 5e-148 | 41 |
