Name : SPO0556 (SPO0556) Accession : YP_165817.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 552230 - 553540 bp Length : 1311 bp Strand : - Note : - DNA sequence : ATGAAACACGCAAGATCGGGAACGCAAGCCATGTCGCGCCAAACGGATCAGGACCGGATCGCCGTGCTTGGGCTGGGCTA TGTCGGCCTGCCGCTGGCGCTGGGTCTGGCGCGGGCAGGCTTTCAGACGCTGGGGTTCGACACCGATGCCGCGCATATCA CGGCGCTGGGGCGCGGCCATGATCGCAATGGCGAGGTCTCGGAACGCTCGCTGGCCGAGACGCGGGCGCGGTTTTCCTGC GATCCTGCCGATCTGGCGGGCTGCACCGTCTATATCATCGGCGTGCCGACCCCGATCACCGATGCCAAGACTCCCGATCT GGAACCGCTCAAGGGCGCCTGCCGGATGATCGCGCCGCATCTGGTGCCCGGCGACATGGTGATCGTCGAAAGCACGGTCT ACCCTGGCGTGACCGAAGAGATCTGCGGCCCGGTTCTGGCCGAGGGCAGCGGGCTGGAGCTTTACTCGCAGATCAAGCTG GCCTACTCGCCCGAGCGGGTGAACCCCGGCGATGCCGAGCATTCGATGGAGAATGTGGTCAAGATCGTCTCGGCCCAGGA CGCCGAAACGCTGGACCGGGTCGCCGCCATCTATGCCCCGGTGGTCAAGGCGGGTGTGCATAGGGCCAGTTCAATCCGCA CCGCCGAGGCCGCCAAGGTGATCGAGAATACCCAGCGCGACCTCAACATCGCCCTGGTCAACGAATTCTCGCTGATCTTC TCGCGCCTGGGGCTCGACACGCTCGAAGTGCTGGAGGCCGCCGGAACCAAGTGGAACTTCCTGCCCTTCAAGCCCGGGCT GGTGGGCGGGCACTGCATCGGGGTCGACCCCTATTACCTGACCTACCGGGCCGAGCAGAGCGGCTATCACCCCGAGGTGA TCCTGGCGGGCCGGCGCATCAACGACAACATGGGCCGCCACGTGGCGCGCCAGCTGATCAAGGCTCTGATCGCCCGCCGC ATCGACCCGGGCCGGGCGCGGGTGCTGGTGATGGGCTTCACCTTCAAGGAGAACTGCGCCGATATCCGCAATACGCGGGT GGCCGACATCCTGTCGGAACTGGCCGAATACTCGGTCGCGACCGAGGTCTGCGACCCCTGGGTTGACCCCGAGGCAATGG AACAGGAATATGGCGTCACACCGGTTTCGGAACCCACGACCGGCGCTTATGATGCGATTGTTGTTGCGGTGGCGCATCGG CAGTTTGTCGAGTTGGGGGCTGCGGCCATTCGGGCCTTTGGCCTGCCGGGCGCTGTCCTCTATGATATCAAGGGCATTTT TTCCAAATCCGACACGGATCTAAGGCTATAG Protein sequence : MKHARSGTQAMSRQTDQDRIAVLGLGYVGLPLALGLARAGFQTLGFDTDAAHITALGRGHDRNGEVSERSLAETRARFSC DPADLAGCTVYIIGVPTPITDAKTPDLEPLKGACRMIAPHLVPGDMVIVESTVYPGVTEEICGPVLAEGSGLELYSQIKL AYSPERVNPGDAEHSMENVVKIVSAQDAETLDRVAAIYAPVVKAGVHRASSIRTAEAAKVIENTQRDLNIALVNEFSLIF SRLGLDTLEVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLTYRAEQSGYHPEVILAGRRINDNMGRHVARQLIKALIARR IDPGRARVLVMGFTFKENCADIRNTRVADILSELAEYSVATEVCDPWVDPEAMEQEYGVTPVSEPTTGAYDAIVVAVAHR QFVELGAAAIRAFGLPGAVLYDIKGIFSKSDTDLRL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-102 | 53 |
tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-102 | 53 |
cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-85 | 47 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SPO0556 | YP_165817.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 2e-102 | 53 |