Gene Information

Name : SPO0434 (SPO0434)
Accession : YP_165697.1
Strain : Ruegeria pomeroyi DSS-3
Genome accession: NC_003911
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 450704 - 451399 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGACCCTGCCCTTGTCCTAGAAGATGCCCGTTTGTCGCTCGAAGGCAATGCCGGCAAGGTCGATATCCTGCGCGG
TATCTCGCTGAATGTGCCCGCCGGGCAGACGCTGGGGCTGGTCGGGCCTTCGGGGTCGGGCAAATCCTCGCTGTTGATGC
TGATGGGGGGGCTTGAACGCGCCACCGGTGGCCGGGTGCAGGCCCTGGGGCATGATCTGGGCGCGATGGACGAAGATGCG
CTGGCCCGCTTCCGCCGCGACCGGATGGGCGTGGTGTTCCAAAGCTTTCACCTGATCCCCACCATGACCGCGCTGGAAAA
CGTGGCCACGCCGCTGGAACTGGCCGGCCATCGCGACGCGTTCGCACGCGCAGCAGCCGAGCTTGAGGCGGTGGGTCTGT
CCCACCGCGCCGGACATTACCCGGCGCAGCTTTCGGGCGGCGAACAACAGCGTGTGGCGCTGGCCCGCGCCGCCGCACCC
CGCCCCGCCATCCTGCTGGCCGACGAGCCAACCGGCAATCTGGACGAGGCCAATGGCGCCGCGATCATGGATCTGCTGTT
CGGCCTGCGCGACCAATATGGCGCAACGTTGGTTCTGGTCACCCACAGCGCCCGGCTGGCCAGCCGCTGCGACCGGGTGG
TCCGCCTGCGCGATGGCCGTATCGAGGATACCGAGAGCCGTGAGGCCGCGCAATGA

Protein sequence : 
MTDPALVLEDARLSLEGNAGKVDILRGISLNVPAGQTLGLVGPSGSGKSSLLMLMGGLERATGGRVQALGHDLGAMDEDA
LARFRRDRMGVVFQSFHLIPTMTALENVATPLELAGHRDAFARAAAELEAVGLSHRAGHYPAQLSGGEQQRVALARAAAP
RPAILLADEPTGNLDEANGAAIMDLLFGLRDQYGATLVLVTHSARLASRCDRVVRLRDGRIEDTESREAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-12 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-14 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-14 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPO0434 YP_165697.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-18 46
SPO0434 YP_165697.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-18 41