|
Name : hslU (SPO3882) Accession : YP_169070.1 Strain : Ruegeria pomeroyi DSS-3 Genome accession: NC_003911 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 4097215 - 4098522 bp Length : 1308 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGACCGACCTGACCCCGCGCGAGATCGTCTCGGAGCTTGACCGTTTCATCATCGGCCAGAAAGACGCCAAACGCGCCGT CGCCGTGGCGCTGCGCAACCGCTGGCGGCGCAAGCAGCTGGCCGACGATCTGCGCGACGAGGTATACCCCAAGAACATCC TGATGATCGGCCCCACCGGGGTCGGCAAGACCGAGATCAGCCGCCGCCTGGCGAAACTCGCGCGCGCGCCCTTCATCAAG GTCGAGGCGACCAAGTTCACCGAGGTCGGTTATGTCGGGCGCGATGTGGAACAGATCATCCGCGACCTTGCCGATGCCGC CATCGTGCAAACCCGCGACTATATGCGGGACGAGGTCCGCGCCCGCGCCCATAAGGCGGCCGAGGACAGGGTGATCACGG CCATTGCTGGCGAGGATGCGCGCGAGGGCACCCGCGAGATGTTCCGCAAGAAGCTGAAATCGGGCGAGTTGGACGATACC GTGATCGAGCTGGAAGTCGCCGATGGCGCGAACCCGATGCCGATGTTCGAAATCCCGGGCCAGCCGGGCGGCAATATGGG CATGATGAATCTGGGTGACCTGTTCGGCAAGGCCTTTGCCGGGCGCACCACCCGCAAGAAACTGCGCGTGGCTGACAGCT ATGAAATCCTGATCGGGGAAGAGGCCGACAAGCTGCTGGATGACGAGCTGGTCAACAAGACCGCGCTGGAAGCGGTCGAA CAGAACGGTATCGTGTTTCTGGACGAGATCGACAAGGTCTGCGCTCGCTCGGACGCGCGCGGGGCCGATGTCAGCCGCGA GGGCGTGCAGCGCGACCTGCTGCCGCTGATCGAGGGCACTACTGTCAGCACCAAATACGGGCCGATCAAGACCGACCATA TCCTGTTCATCGCCAGCGGGGCCTTTCACATCGCCAAGCCCAGCGACCTGCTGCCCGAATTGCAGGGTCGGCTGCCGATC CGGGTGGAGCTGCGCGCGCTGACCGAAGAGGATTTTGTGCGCATCCTGACCGAAACCGACAATGCGCTGACCCTGCAATA CACGGCGCTGATGGGCACCGAGAACGTGGCCGTTACCTTTACCCCCGACGGTATCGCGGCGCTGGCCCATATCGCCGCCG AGGTGAACCAGAGCGTCGAAAATATCGGTGCGCGGCGGCTTTACACCGTGATGGAGCGGGTGTTCGAGGAACTGTCCTTT ACCGCGCCCGACCGGTCGGGCGAGGCGGTGACGGTGGATGCCGGTTTTGTCGATACCAATCTGGGAGAGCTCACACGCTC GACCGACCTGAGCCGTTACGTTTTGTAA Protein sequence : MTDLTPREIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLADDLRDEVYPKNILMIGPTGVGKTEISRRLAKLARAPFIK VEATKFTEVGYVGRDVEQIIRDLADAAIVQTRDYMRDEVRARAHKAAEDRVITAIAGEDAREGTREMFRKKLKSGELDDT VIELEVADGANPMPMFEIPGQPGGNMGMMNLGDLFGKAFAGRTTRKKLRVADSYEILIGEEADKLLDDELVNKTALEAVE QNGIVFLDEIDKVCARSDARGADVSREGVQRDLLPLIEGTTVSTKYGPIKTDHILFIASGAFHIAKPSDLLPELQGRLPI RVELRALTEEDFVRILTETDNALTLQYTALMGTENVAVTFTPDGIAALAHIAAEVNQSVENIGARRLYTVMERVFEELSF TAPDRSGEAVTVDAGFVDTNLGELTRSTDLSRYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-89 | 45 |
