Gene Information

Name : hemC (SPO3649)
Accession : YP_168844.1
Strain : Ruegeria pomeroyi DSS-3
Genome accession: NC_003911
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3851322 - 3852281 bp
Length : 960 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGAAAATCGCACTCCCCTCTCCCGCATCGCCGCTGAAGATCGGCACCCGTGGCTCGCCGCTGGCGCTTGCGCAGGCGTA
TGAGACCCGCCATCGCCTGGGTGCCGCCTTCGACCTGCCCGAGGACGCGTTCGAGATCGTGGTGATCTCGACCACCGGCG
ACAACCGCGCGATGATCGAGGCCGACCGCCCGCTGAAAGAGATCGGCAACAAGGGCCTCTTCACCAAGGAGATCGAAGAG
GCGATGCTGCGCGGCGATATCGACATCGCAGTGCATTCGACCAAGGACATGCCGGTGGAACAGCCCGCCGGTCTGGTGCT
CGACACCTTCCTGCCGCGCGAGGATGTGCGCGACGCCTTCATCTCGCCCGGCCATTCGGCGATCCGCGACCTGCCGCTGG
GGGCCGTGGTCGGCACCTCGTCGCTGCGCCGCAAGGCGCAGCTGCTCAATCGTCGGCCCGACCTCAAGGTTGTCGAGTTC
CGCGGCAATGTGCAGACACGCCTGCGCAAACTGTCCGAGGGCGTGGCCGAATGCACCTTCCTTGCCATGGCAGGCATCCG
ACGGTTGAACATGGCCGAGGTGCCCGCCACCGCGATCTCGCCCGACGACATGCTGCCCGCCATCGCACAGGGCGCCATCG
GGATCGAACGGCGCATGGACGATACCCGCGCCGCCGAGATGCTGACCGCCATCCACCATGGCGAAACCGGTCAGCGGCTG
GCCGCCGAACGGGCGCTGCTCGCTGCACTCGACGGATCCTGCGAGACCCCCATCGCCGGTCTGGCCGAGCTGGACGGCAC
CACCCTGCGCCTGCGCGGCGAGGTGCTGCGCCCCGACGGGTCCGAAGCGATCACGCTTGACCGCAGCGGCGACGTGGCCG
ACGGCCCGGCGCTGGGCACCGAAATGGCGCGCGAGCTGCTGGCACAGGCGGGGCCCGGCTTCTTCGACTGGCGCGGCTGA

Protein sequence : 
MKIALPSPASPLKIGTRGSPLALAQAYETRHRLGAAFDLPEDAFEIVVISTTGDNRAMIEADRPLKEIGNKGLFTKEIEE
AMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRDLPLGAVVGTSSLRRKAQLLNRRPDLKVVEF
RGNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATAISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRL
AAERALLAALDGSCETPIAGLAELDGTTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQAGPGFFDWRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-44 44
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-44 44