Gene Information

Name : SPO3584 (SPO3584)
Accession : YP_168779.1
Strain : Ruegeria pomeroyi DSS-3
Genome accession: NC_003911
Putative virulence/resistance : Resistance
Product : drug/metabolite transporter family membrane protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 3791729 - 3792649 bp
Length : 921 bp
Strand : +
Note : identified by similarity to SP:P42194; match to protein family HMM PF00892

DNA sequence :
ATGAGGCCCCCAATGTCACGGACAACAGATATCGCCCTGACCGCAATCGCCCCGGCCATCTGGGGCAGCTCCTATTTCGT
CACCACCCAGTTCCTGCCCGCGCATTCGCCCTTTGTCGTGGCGCTGCTGCGAGCGCTGCCGGCCGGGCTGCTCCTGATGC
TGCTGGTGCGCAAATTGCCGCCGCGCGGCTGGATCGGGCGACTGCTGATCCTGGGCGCGCTGAACTTTGCGGTGTTCTGG
TCGCTGCTTTTCGTCGCCGCCTATCGCCTGCCGGGCGGGGTGGCCGCGACGGTGGGCGCGGTACAGCCGCTGCTGGTGGT
GTTCCTCTCGGCGGTGGCGTTGGGGACGCAGATCCGGCTGGGCGCGGTTCTGTCGGCGCTGGCGGGGATTGTCGGCGTGG
CACTGTTGCTGCTGGGGCCCGAGGCGCGGCTGGACACGGTGGGGGTGCTGGCCGGGTTGGGCGGTGCGCTGTCGATGGCG
GTGGGAGTGGTGCTAACCCGCAAATGGCGGCCTGATGTGCCACTGGTCACATTCACCGCCTGGCAGCTGACCGCCGGTGG
CCTGCTGCTGATCCCGGTGGCCTGGCTGGCCGCGCCCGACTGGCCCGGCCTGAGCCTGACCAATCTGGCGGCGCTGGCCT
GGCTTGGCCTGATCGGTGGAGCGCTGACCTATATCCTGTGGTTTCGTGGTCTGGCCCGGATCGAACCGGCGGCGGTCTCG
CTGTTGGGCATCCTCAGCCCGTTGACTGCGGTGATCCTGGGCTGGCTGGCCCTGGGCGAGGCGTTGAGCCCGGTTCAGGG
GTTGGGCGCGGTCATTGTGCTGGGCGCGGTCTGGATCGGGCAGCGCCCGCCGGGCGCCTCCCGCCTGTCGAACTTGGTTC
AGCCCAGATGCGGGGCAAAAGCCGCAACGACACGTTCGTAG

Protein sequence :
MRPPMSRTTDIALTAIAPAIWGSSYFVTTQFLPAHSPFVVALLRALPAGLLLMLLVRKLPPRGWIGRLLILGALNFAVFW
SLLFVAAYRLPGGVAATVGAVQPLLVVFLSAVALGTQIRLGAVLSALAGIVGVALLLLGPEARLDTVGVLAGLGGALSMA
VGVVLTRKWRPDVPLVTFTAWQLTAGGLLLIPVAWLAAPDWPGLSLTNLAALAWLGLIGGALTYILWFRGLARIEPAAVS
LLGILSPLTAVILGWLALGEALSPVQGLGAVIVLGAVWIGQRPPGASRLSNLVQPRCGAKAATTRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM AGK07028.1 PecM Not tested SGI1 Protein 4e-48 65
pecM AGK07086.1 PecM Not tested SGI1 Protein 4e-48 65
pecM ACN81012.1 PecM Not tested AbaR5 Protein 5e-48 65
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 4e-48 65